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thalfshear-imper-ss.sh - sphere - GPU-based 3D discrete element method algorith… |
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git clone git://src.adamsgaard.dk/sphere |
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thalfshear-imper-ss.sh (1315B) |
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1 #!/bin/sh |
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2 #PBS -N hs-imper-ss |
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3 #PBS -l nodes=1:ppn=3 |
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4 #PBS -l walltime=48:00:00 |
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5 #PBS -q qfermi |
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6 #PBS -M [email protected] |
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7 #PBS -m abe |
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8 |
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9 # Grendel CUDA |
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10 source /com/gcc/4.6.4/load.sh |
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11 CUDAPATH=/com/cuda/5.5.22 |
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12 export PATH=$HOME/bin:$PATH |
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13 export PATH=$CUDAPATH/bin:$PATH |
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14 export LD_LIBRARY_PATH=$CUDAPATH/lib64:$CUDAPATH/lib:$LD_LIBRARY_PATH |
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15 |
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16 # Manually installed Python modules |
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17 export PYTHONPATH=$HOME/.local/lib/python:$PYTHONPATH |
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18 export PYTHONPATH=$HOME/.local/lib64/python:$PYTHONPATH |
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19 |
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20 # Manually installed Python |
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21 #export PATH=/home/adc/.local/bin:$PATH |
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22 |
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23 # Shared Python2.7 |
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24 PYTHON=/com/python/2.7.6 |
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25 export PYTHONPATH=$PYTHON/lib:$PYTHONPATH |
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26 export PATH=$PYTHON/bin:$PATH |
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27 |
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28 echo "`whoami`@`hostname`" |
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29 echo "Start at `date`" |
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30 |
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31 ORIGDIR=/home/adc/code/sphere |
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32 #WORKDIR=/scratch/$PBS_JOBID |
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33 WORKDIR=$ORIGDIR |
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34 |
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35 #cp -r $ORIGDIR/* $WORKDIR |
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36 |
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37 cd $WORKDIR |
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38 nvidia-smi |
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39 rm CMakeCache.txt |
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40 cmake . && make |
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41 cd python |
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42 # $ ipython halfshear-darcy-stress-starter.py <device> <fluid> <c_phi> <… |
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43 python halfshear-darcy-stress-starter.py 0 1 1.0 3.5e-15 20000.0 1.797e-… |
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44 python halfshear-darcy-stress-starter.py 1 1 1.0 3.5e-15 20000.0 1.797e-… |
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45 python halfshear-darcy-stress-starter.py 2 1 1.0 3.5e-15 20000.0 1.797e-… |
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46 wait |
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47 |
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48 #cp $WORKDIR/output/* $ORIGDIR/output/ |
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49 |
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50 echo "End at `date`" |
