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	tUpdate publication list - sphere - GPU-based 3D discrete element method algori…
	git clone git://src.adamsgaard.dk/sphere
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	commit fe991f9a76dc5f80931b523ad11fd5d4a526110e
	parent 6a26c98ac0803ad905ddd315980198fe20595c8c
	Author: Anders Damsgaard <[email protected]>
	Date: Wed, 20 Dec 2017 17:28:32 -0800

	Update publication list

	Diffstat:
	M README.rst \| 19 ++++++++++++-------

	1 file changed, 12 insertions(+), 7 deletions(-)
	---
	diff --git a/README.rst b/README.rst
	t@@ -12,9 +12,9 @@ Navier-Stokes or Darcy formulations.
	A powerful Nvidia GPU with proper support for double precision floating is
	highly recommended. ``sphere`` has been tested with Nvidia Tesla GPUs, and has
	successfully been employed on the clusters `Grendel
	-<http://www.cscaa.dk/grendel/hardware/>`_ (Aarhus University), `ICME
	+<https://www.cscaa.dk/grendel/hardware/>`_ (Aarhus University), `ICME
	<https://icme.stanford.edu/computer-resources/gpu-cluster>`_ (Stanford
	-University), `Comet <http://www.sdsc.edu/services/hpc/hpc_systems.html#comet>`…
	+University), `Comet <https://www.sdsc.edu/services/hpc/hpc_systems.html#comet>…
	(San Diego Supercomputing Center), `Bridges
	<https://psc.edu/index.php/resources/computing/bridges>`_ (Portland
	Supercomputing Center), and `Stampede <https://www.tacc.utexas.edu/stampede/>`…
	t@@ -81,7 +81,7 @@ the `html <doc/html/index.html>`_ and `pdf <doc/pdf/sphere.p…

	Examples
	--------
	-All examples are visualized using `ParaView <http://www.paraview.org>`_.
	+All examples are visualized using `ParaView <https://www.paraview.org>`_.

	.. figure:: doc/sphinx/img/stokes.png
	:scale: 75%
	t@@ -109,19 +109,24 @@ Publications
	``sphere`` has been used to produce results in the following scientific
	publications and presentations:

	+- Damsgaard, A., J. Suckale, J. A. Piotrowski, M. Houssais, M. R. Siegfried, H.
	+ A. Fricker (2017), Sediment behavior controls equilibrium width of subglacial
	+ channels, Journal of Glaciology,
	+ `doi:10.1017/jog.2017.71
	+ <https://doi.org/10.1017/jog.2017.71>`_.
	- Damsgaard, A., A. Cabrales-Vargas, J. Suckale, and L. Goren (2017), The
	coupled dynamics of meltwater percolation and granular deformation in the
	sediment layer underlying parts of the big ice sheets, Poromechanics VI,
	`doi:10.1061/9780784480779.024
	- <https://dx.doi.org/10.1061/9780784480779.024>`_.
	+ <https://doi.org/10.1061/9780784480779.024>`_.
	- Damsgaard, A., D.L. Egholm, L.H. Beem, S. Tulaczyk, N.K. Larsen, J.A.
	Piotrowski, and M.R. Siegfried (2016), Ice flow dynamics forced by water
	pressure variations in subglacial granular beds, Geophysical Research Letter…
	- 43, `doi:10.1002/2016GL071579 <http://dx.doi.org/10.1002/2016GL071579>`_.
	+ 43, `doi:10.1002/2016GL071579 <https://doi.org/10.1002/2016GL071579>`_.
	- Damsgaard, A., D.L. Egholm, J.A. Piotrowski, S. Tulaczyk, N.K. Larsen, and
	C.F. Brædstrup (2015), A new methodology to simulate subglacial deformation…
	water-saturated granular material, The Cryosphere, 9, 2183-2200,
	- `doi:10.5194/tc-9-2183-2015 <http://dx.doi.org/10.5194/tc-9-2183-2015>`_.
	+ `doi:10.5194/tc-9-2183-2015 <https://doi.org/10.5194/tc-9-2183-2015>`_.
	- Damsgaard, A., D.L. Egholm, J.A. Piotrowski, S. Tulaczyk, N.K. Larsen, and
	C.F. Brædstrup (2014), Numerical modeling of particle-fluid mixtures in a
	subglacial setting. `Poster at Americal Geophysical Union Fall Meeting
	t@@ -129,7 +134,7 @@ publications and presentations:
	- Damsgaard, A., D.L. Egholm, J.A. Piotrowski, S. Tulaczyk, N.K. Larsen, and
	K. Tylmann (2013), Discrete element modeling of subglacial sediment
	deformation, J. Geophys. Res. Earth Surf., 118, 2230–2242,
	- `doi:10.1002/2013JF002830 <http://dx.doi.org/10.1002/2013JF002830>`_.
	+ `doi:10.1002/2013JF002830 <https://doi.org/10.1002/2013JF002830>`_.
	- Damsgaard, A., D.L. Egholm, J.A. Piotrowski, S. Tulaczyk, and N.K. Larsen
	(2013), Discrete element modeling of subglacial sediment deformation.
	Talk at American Geophysical Fall Meeting 2013.