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	tadd preliminary job generation script - sphere - GPU-based 3D discrete element…
	git clone git://src.adamsgaard.dk/sphere
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	---
	commit b3fe59280cf6edd295c93d9d25c8abcc8686b267
	parent 5d0c3d2e690e751c1660c570429b796abd7cb002
	Author: Anders Damsgaard Christensen <[email protected]>
	Date: Thu, 2 Jun 2016 15:19:41 -0700

	add preliminary job generation script

	Diffstat:
	A python/generate-rate-state-scripts… \| 56 +++++++++++++++++++++++++++…

	1 file changed, 56 insertions(+), 0 deletions(-)
	---
	diff --git a/python/generate-rate-state-scripts.py b/python/generate-rate-state…
	t@@ -0,0 +1,56 @@
	+#!/usr/bin/env python
	+import subprocess
	+
	+# Account and cluster information
	+# https://portal.xsede.org/sdsc-comet
	+# https://www.sdsc.edu/support/user_guides/comet.html
	+account = 'csd492' # from `show_accounts`
	+jobname_prefix = 'rs0-'
	+walltime = '2-0' # hours:minutes:seconds or days-hours
	+partition = 'gpu-shared'
	+no_gpus = 1
	+no_nodes = 1
	+ntasks_per_node = 1
	+
	+# Simulation parameter values
	+effective_stresses = [10e3, 20e3, 100e3, 200e3, 1000e3, 2000e3]
	+velfacs = [0.1, 1.0, 10.0]
	+
	+for effective_stress in effective_stresses:
	+ for velfac in velfacs:
	+
	+ jobname = 'rs0-' + str(effective_stress) + 'Pa-v=' + str(velfac)
	+
	+ # Generate scripts for queue manager, submit with `sbatch <script>`
	+ generate_slurm_script(jobname,
	+ effective_stress,
	+ velfac)
	+
	+ generate_slurm_continue_script(jobname,
	+ effective_stress,
	+ velfac)
	+
	+ generate_simulation_script(jobname,
	+ effective_stress,
	+ velfac)
	+
	+ generate_simulation_continue_script(jobname,
	+ effective_stress,
	+ velfac)
	+
	+def generate_slurm_script(effective_stress, velfac):
	+
	+ slurm_script = '''#!/bin/bash
	+ #SBATCH -A {account}
	+ #SBATCH --job-name
	+ '''.format(account)
	+
	+slurm_continue_script = '''
	+'''
	+
	+# Generate scripts for sphere
	+simulation_script = '''#!/usr/bin/env python
	+'''
	+
	+simulation_continue_script = '''#!/usr/bin/env python
	+'''