| tcompress.jl - seaice-experiments - sea ice experiments using Granular.jl | |
| git clone git://src.adamsgaard.dk/seaice-experiments | |
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| README | |
| LICENSE | |
| --- | |
| tcompress.jl (8221B) | |
| --- | |
| 1 #/usr/bin/env julia | |
| 2 ENV["MPLBACKEND"] = "Agg" | |
| 3 import Granular | |
| 4 import PyPlot | |
| 5 import ArgParse | |
| 6 using Random | |
| 7 import DelimitedFiles | |
| 8 | |
| 9 let | |
| 10 render = false | |
| 11 | |
| 12 function parse_command_line() | |
| 13 s = ArgParse.ArgParseSettings() | |
| 14 ArgParse.@add_arg_table s begin | |
| 15 "--E" | |
| 16 help = "Young's modulus [Pa]" | |
| 17 arg_type = Float64 | |
| 18 default = 2e7 | |
| 19 "--nu" | |
| 20 help = "Poisson's ratio [-]" | |
| 21 arg_type = Float64 | |
| 22 default = 0.285 | |
| 23 "--mu_d" | |
| 24 help = "dynamic friction coefficient [-]" | |
| 25 arg_type = Float64 | |
| 26 default = 0.3 | |
| 27 "--tensile_strength" | |
| 28 help = "the maximum tensile strength [Pa]" | |
| 29 arg_type = Float64 | |
| 30 default = 400e3 | |
| 31 "--tensile_strength_std_dev" | |
| 32 help = "standard deviation of the maximum tensile strength [… | |
| 33 arg_type = Float64 | |
| 34 default = 0.0 | |
| 35 "--shear_strength" | |
| 36 help = "the maximum shear strength [Pa]" | |
| 37 arg_type = Float64 | |
| 38 default = 200e3 | |
| 39 "--fracture_toughness" | |
| 40 help = "fracture toughness [Pa*m^{1/2}]" | |
| 41 arg_type = Float64 | |
| 42 default = 1e20 | |
| 43 #default = 1285e3 | |
| 44 "--r_min" | |
| 45 help = "min. grain radius [m]" | |
| 46 arg_type = Float64 | |
| 47 default = 20.0 | |
| 48 "--r_max" | |
| 49 help = "max. grain radius [m]" | |
| 50 arg_type = Float64 | |
| 51 default = 80.0 | |
| 52 "--thickness" | |
| 53 help = "grain thickness [m]" | |
| 54 arg_type = Float64 | |
| 55 default = 1. | |
| 56 "--rotating" | |
| 57 help = "allow the grains to rotate" | |
| 58 arg_type = Bool | |
| 59 default = true | |
| 60 "--compressive_velocity" | |
| 61 help = "compressive velocity [m/s]" | |
| 62 arg_type = Float64 | |
| 63 default = 0.1 | |
| 64 "--seed" | |
| 65 help = "seed for the pseudo RNG" | |
| 66 arg_type = Int | |
| 67 default = 1 | |
| 68 "id" | |
| 69 help = "simulation id" | |
| 70 required = true | |
| 71 end | |
| 72 return ArgParse.parse_args(s) | |
| 73 end | |
| 74 | |
| 75 function report_args(parsed_args) | |
| 76 println("Parsed args:") | |
| 77 for (arg,val) in parsed_args | |
| 78 println(" $arg => $val") | |
| 79 end | |
| 80 end | |
| 81 | |
| 82 function run_simulation(id::String, | |
| 83 E::Float64, | |
| 84 nu::Float64, | |
| 85 mu_d::Float64, | |
| 86 tensile_strength::Float64, | |
| 87 tensile_strength_std_dev::Float64, | |
| 88 shear_strength::Float64, | |
| 89 fracture_toughness::Float64, | |
| 90 r_min::Float64, | |
| 91 r_max::Float64, | |
| 92 thickness::Float64, | |
| 93 rotating::Bool, | |
| 94 compressive_velocity::Float64, | |
| 95 seed::Int) | |
| 96 | |
| 97 ####################################################################… | |
| 98 #### SIMULATION PARAMETERS | |
| 99 ####################################################################… | |
| 100 | |
| 101 # Grain mechanical properties | |
| 102 youngs_modulus = E # Elastic modulus [Pa] | |
| 103 poissons_ratio = nu # Shear-stiffness ratio [-] | |
| 104 contact_dynamic_friction = mu_d # Coulomb-frictional coefficient [-] | |
| 105 | |
| 106 # Simulation duration [s] | |
| 107 t_total = 60.0 * 60.0 * 2.0 | |
| 108 | |
| 109 # Temporal interval between output files | |
| 110 file_dt = 18.0 | |
| 111 | |
| 112 ####################################################################… | |
| 113 #### Read prior state | |
| 114 ####################################################################… | |
| 115 sim = Granular.readSimulation("rotating01-seed1/rotating01-seed1… | |
| 116 sim.id = id | |
| 117 Granular.resetTime!(sim) | |
| 118 Granular.zeroKinematics!(sim) | |
| 119 Granular.removeSimulationFiles(sim) | |
| 120 | |
| 121 # Set grain mechanical properties | |
| 122 for grain in sim.grains | |
| 123 grain.youngs_modulus = youngs_modulus | |
| 124 grain.poissons_ratio = poissons_ratio | |
| 125 grain.tensile_strength = abs(tensile_strength + | |
| 126 randn()*tensile_strength_std_dev) | |
| 127 grain.shear_strength = abs(shear_strength + | |
| 128 randn()*tensile_strength_std_dev) | |
| 129 grain.contact_static_friction = contact_dynamic_friction # mu_s… | |
| 130 grain.contact_dynamic_friction = contact_dynamic_friction | |
| 131 grain.fracture_toughness = fracture_toughness | |
| 132 grain.rotating = rotating | |
| 133 grain.ocean_drag_coeff_horiz = 0.0 # don't include drag on ends | |
| 134 end | |
| 135 | |
| 136 x_max = -Inf | |
| 137 x_min = +Inf | |
| 138 y_max = -Inf | |
| 139 y_min = +Inf | |
| 140 r_max = 0.0 | |
| 141 for grain in sim.grains | |
| 142 r = grain.contact_radius | |
| 143 | |
| 144 if x_min > grain.lin_pos[1] - r | |
| 145 x_min = grain.lin_pos[1] - r | |
| 146 end | |
| 147 | |
| 148 if x_max < grain.lin_pos[1] + r | |
| 149 x_max = grain.lin_pos[1] + r | |
| 150 end | |
| 151 | |
| 152 if y_min > grain.lin_pos[2] - r | |
| 153 y_min = grain.lin_pos[2] - r | |
| 154 end | |
| 155 | |
| 156 if y_max < grain.lin_pos[2] + r | |
| 157 y_max = grain.lin_pos[2] + r | |
| 158 end | |
| 159 | |
| 160 if r_max < r | |
| 161 r_max = r | |
| 162 end | |
| 163 end | |
| 164 | |
| 165 dx = r_max * 2.0 | |
| 166 L::Vector{Float64} = [(x_max - x_min)*3.0, y_max - y_min, dx] | |
| 167 n = convert(Vector{Int}, floor.(L./dx)) | |
| 168 sim.ocean = Granular.createRegularOceanGrid(n, L, | |
| 169 origo=[x_min - L[1]/3.0,… | |
| 170 time=[0.], name="resized… | |
| 171 Granular.setGridBoundaryConditions!(sim.ocean, "impermeable", "-x +x… | |
| 172 Granular.setGridBoundaryConditions!(sim.ocean, "impermeable", "-y +y… | |
| 173 | |
| 174 sim.walls[1].bc = "velocity" | |
| 175 sim.walls[1].vel = -(y_max - y_min) * 0.2 / t_total | |
| 176 | |
| 177 # fix grains adjacent to walls to create no-slip BC | |
| 178 fixed_thickness = 2.0 * r_max | |
| 179 for grain in sim.grains | |
| 180 if grain.lin_pos[2] <= y_min + fixed_thickness | |
| 181 grain.fixed = true | |
| 182 grain.color = 1 | |
| 183 elseif grain.lin_pos[2] >= y_max - fixed_thickness | |
| 184 grain.allow_y_acc = true | |
| 185 grain.fixed = true | |
| 186 grain.color = 1 | |
| 187 end | |
| 188 end | |
| 189 | |
| 190 Granular.setTimeStep!(sim) | |
| 191 Granular.setTotalTime!(sim, t_total) | |
| 192 Granular.setOutputFileInterval!(sim, file_dt) | |
| 193 render && Granular.plotGrains(sim, verbose=true) | |
| 194 | |
| 195 ####################################################################… | |
| 196 #### RUN THE SIMULATION | |
| 197 ####################################################################… | |
| 198 | |
| 199 # Run the consolidation experiment, and monitor top wall positio… | |
| 200 # time | |
| 201 time = Float64[] | |
| 202 compaction = Float64[] | |
| 203 effective_normal_stress = Float64[] | |
| 204 while sim.time < sim.time_total | |
| 205 | |
| 206 for i=1:100 | |
| 207 Granular.run!(sim, single_step=true) | |
| 208 end | |
| 209 | |
| 210 append!(time, sim.time) | |
| 211 append!(compaction, sim.walls[1].pos) | |
| 212 append!(effective_normal_stress, Granular.getWallNormalS… | |
| 213 | |
| 214 end | |
| 215 Granular.writeSimulation(sim) | |
| 216 | |
| 217 defined_normal_stress = ones(length(effective_normal_stress)) * | |
| 218 Granular.getWallNormalStress(sim, stress_type="effective") | |
| 219 PyPlot.subplot(211) | |
| 220 PyPlot.subplots_adjust(hspace=0.0) | |
| 221 ax1 = PyPlot.gca() | |
| 222 PyPlot.setp(ax1[:get_xticklabels](),visible=false) # Disable x l… | |
| 223 PyPlot.plot(time, compaction) | |
| 224 PyPlot.ylabel("Top wall height [m]") | |
| 225 PyPlot.subplot(212, sharex=ax1) | |
| 226 PyPlot.plot(time, defined_normal_stress) | |
| 227 PyPlot.plot(time, effective_normal_stress) | |
| 228 PyPlot.xlabel("Time [s]") | |
| 229 PyPlot.ylabel("Normal stress [Pa]") | |
| 230 PyPlot.savefig(sim.id * "-time_vs_compaction-stress.pdf") | |
| 231 PyPlot.clf() | |
| 232 DelimitedFiles.writedlm(sim.id * "-data.txt", [time, compaction, | |
| 233 … | |
| 234 … | |
| 235 | |
| 236 render && Granular.render(sim, trim=false, animation=true) | |
| 237 end | |
| 238 | |
| 239 function main() | |
| 240 parsed_args = parse_command_line() | |
| 241 report_args(parsed_args) | |
| 242 | |
| 243 seed = parsed_args["seed"] | |
| 244 run_simulation(parsed_args["id"] * "-seed" * string(seed), | |
| 245 parsed_args["E"], | |
| 246 parsed_args["nu"], | |
| 247 parsed_args["mu_d"], | |
| 248 parsed_args["tensile_strength"], | |
| 249 parsed_args["tensile_strength_std_dev"], | |
| 250 parsed_args["shear_strength"], | |
| 251 parsed_args["fracture_toughness"], | |
| 252 parsed_args["r_min"], | |
| 253 parsed_args["r_max"], | |
| 254 parsed_args["thickness"], | |
| 255 parsed_args["rotating"], | |
| 256 parsed_args["compressive_velocity"], | |
| 257 seed) | |
| 258 end | |
| 259 | |
| 260 main() | |
| 261 end |