 |
tsave to dedicated folder - cosmo - front and backend for Markov-Chain Monte Ca… |
 |
git clone git://src.adamsgaard.dk/cosmo |
 |
Log |
|
Files |
|
Refs |
|
README |
|
LICENSE |
|
--- |
|
commit d0c4b1cc26c1f062ca7176a4731ebbe8b2b6c21d |
|
parent 3fee2ba842e6ca5c1ff761a054b10d1c8feb86b0 |
|
Author: Anders Damsgaard <[email protected]> |
|
Date: Thu, 27 Aug 2015 11:56:57 +0200 |
|
|
|
save to dedicated folder |
|
|
|
Diffstat: |
|
M matlab/file_scanner_mcmc_starter.m | 7 +++++-- |
|
M matlab/generate_plots.m | 4 ++-- |
|
M matlab/mcmc_inversion.m | 4 ++-- |
|
|
|
3 files changed, 9 insertions(+), 6 deletions(-) |
|
--- |
|
diff --git a/matlab/file_scanner_mcmc_starter.m b/matlab/file_scanner_mcmc_star… |
|
t@@ -10,6 +10,9 @@ |
|
% folder containing input files from web interface ("uploadhistory.php") |
|
infolder = '/tmp'; |
|
|
|
+% folder for generated plots |
|
+outfolder = 'output/'; |
|
+ |
|
% uniquely identifying file name prefix for input files |
|
prefix = 'cosmo_'; |
|
|
|
t@@ -68,7 +71,7 @@ while 1 |
|
|
|
% run inversion |
|
[Ss, save_file] = mcmc_inversion(matlab_scripts_folder, debug, ... |
|
- n_walkers, ... |
|
+ n_walkers, outfolder, ... |
|
be_conc, al_conc, c_conc, ne_conc, ... |
|
be_uncer, al_uncer, c_uncer, ne_uncer, ... |
|
be_prod, al_prod, c_prod, ne_prod, ... |
|
t@@ -81,7 +84,7 @@ while 1 |
|
|
|
% generate plots |
|
%CompareWalks2(Ss, save_file) |
|
- generate_plots(Ss, save_file, graphics_formats) |
|
+ generate_plots(Ss, output_folder, save_file, graphics_formats) |
|
|
|
% delete or archive the file so it is not processed again |
|
%delete(infile) |
|
diff --git a/matlab/generate_plots.m b/matlab/generate_plots.m |
|
t@@ -1,4 +1,4 @@ |
|
-function generate_plots(Ss, save_file, formats) |
|
+function generate_plots(Ss, folder, save_file, formats) |
|
|
|
%% Copied from m_pakke2014maj11/CompareWalks2.m |
|
% Generates and saves all relevant figures |
|
t@@ -197,7 +197,7 @@ figure(fh(1)) |
|
|
|
for i=1:4 |
|
figure_save_multiformat(figure(fh(i)), ... |
|
- strcat(save_file, '-', num2str(i)), ... |
|
+ strcat(folder, '/', save_file, '-', num2str(i)), ... |
|
formats); |
|
end |
|
|
|
diff --git a/matlab/mcmc_inversion.m b/matlab/mcmc_inversion.m |
|
t@@ -1,5 +1,5 @@ |
|
function [Ss, save_file] = mcmc_inversion(matlab_scripts_folder, debug, ... |
|
- n_walkers, ... |
|
+ n_walkers, outfolder, ... |
|
be_conc, al_conc, c_conc, ne_conc, ... |
|
be_uncer, al_uncer, c_uncer, ne_uncer, ... |
|
be_prod, al_prod, c_prod, ne_prod, ... |
|
t@@ -253,5 +253,5 @@ if beeps |
|
sound(0.5*sin(1:0.5:500));pause(0.3);sound(0.5*sin(1:0.75:750)) |
|
end |
|
|
|
-save_file = ['Walks_',datestr(now,'yyyymmdd_HHMMSS')]; |
|
+save_file = [outfolder, '/Walks_',datestr(now,'yyyymmdd_HHMMSS')]; |
|
save(save_file,'Ss','save_file') |
