NAME
InSilicoSpectro::Databanks - parsing protein/nucleotides sequence
databanks (fasta, uniprot...)
SYNOPSIS
$/="//\n"; while (<FDIN>){ my
$dbu=InSilicoSpectro::Databanks::DBEntryUniprot->new; $dbu->readDat($_);
my @tmp=$dbu->generateDerivedForms(); unless ( && @tmp){
$dbu->printFasta; $origSeq = $dbu->sequence; } foreach (@tmp){ if
($_->sequence ne $origSeq){ $_->printFasta; } } }
EXPORT
A list of functions that can be exported. You can delete this section if
you don't export anything, such as for a purely object-oriented module.
FUNCTIONS
AUTHOR
Alexandre Masselot, "<
[email protected]>"
BUGS
Please report any bugs or feature requests to
"
[email protected]", or through the web
interface at
<
http://rt.cpan.org/NoAuth/ReportBug.html?Queue=InSilicoSpectro-Databank
s>. I will be notified, and then you'll automatically be notified of
progress on your bug as I make changes.
ACKNOWLEDGEMENTS
COPYRIGHT & LICENSE
Copyright 2006 Alexandre Masselot, all rights reserved.
This program is free software; you can redistribute it and/or modify it
under the same terms as Perl itself.
