tadd scripts to perform shear experiments with different permeabilities and vel… | |
git clone git://src.adamsgaard.dk/sphere | |
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LICENSE | |
--- | |
commit f741757f812fcc95319986bf551a3c6e41604c6c | |
parent b03a72b12c3a7b36d360962ee1f3ad6415505475 | |
Author: Anders Damsgaard <[email protected]> | |
Date: Mon, 17 Nov 2014 11:12:43 +0100 | |
add scripts to perform shear experiments with different permeabilities and velo… | |
Diffstat: | |
A python/halfshear-darcy-velfac0.5.sh | 50 +++++++++++++++++++++++++++++… | |
A python/halfshear-darcy-velfac1.sh | 50 +++++++++++++++++++++++++++++… | |
A python/halfshear-darcy-velfac2.sh | 50 +++++++++++++++++++++++++++++… | |
3 files changed, 150 insertions(+), 0 deletions(-) | |
--- | |
diff --git a/python/halfshear-darcy-velfac0.5.sh b/python/halfshear-darcy-velfa… | |
t@@ -0,0 +1,50 @@ | |
+#!/bin/sh | |
+#PBS -N hs-d-v0.5 | |
+#PBS -l nodes=1:ppn=3 | |
+#PBS -l walltime=48:00:00 | |
+#PBS -q qfermi | |
+#PBS -M [email protected] | |
+#PBS -m abe | |
+ | |
+# Grendel CUDA | |
+source /com/gcc/4.6.4/load.sh | |
+CUDAPATH=/com/cuda/5.5.22 | |
+export PATH=$HOME/bin:$PATH | |
+export PATH=$CUDAPATH/bin:$PATH | |
+export LD_LIBRARY_PATH=$CUDAPATH/lib64:$CUDAPATH/lib:$LD_LIBRARY_PATH | |
+ | |
+# Manually installed Python modules | |
+export PYTHONPATH=$HOME/.local/lib/python:$PYTHONPATH | |
+export PYTHONPATH=$HOME/.local/lib64/python:$PYTHONPATH | |
+ | |
+# Manually installed Python | |
+#export PATH=/home/adc/.local/bin:$PATH | |
+ | |
+# Shared Python2.7 | |
+PYTHON=/com/python/2.7.6 | |
+export PYTHONPATH=$PYTHON/lib:$PYTHONPATH | |
+export PATH=$PYTHON/bin:$PATH | |
+ | |
+echo "`whoami`@`hostname`" | |
+echo "Start at `date`" | |
+ | |
+ORIGDIR=/home/adc/code/sphere | |
+#WORKDIR=/scratch/$PBS_JOBID | |
+WORKDIR=$ORIGDIR | |
+ | |
+#cp -r $ORIGDIR/* $WORKDIR | |
+ | |
+cd $WORKDIR | |
+nvidia-smi | |
+rm CMakeCache.txt | |
+cmake . && make | |
+cd python | |
+# $ python shear-starter.py <DEVICE> <FLUID> <C_PHI> <C_GRAD_P> <SIGMA_0> | |
+python halfshear-darcy-starter.py 0 1 1.0 3.5e-13 20000.0 1.797e-6 0.5 & | |
+python halfshear-darcy-starter.py 1 1 1.0 3.5e-14 20000.0 1.797e-6 0.5 & | |
+python halfshear-darcy-starter.py 2 1 1.0 3.5e-15 20000.0 1.797e-6 0.5 & | |
+wait | |
+ | |
+#cp $WORKDIR/output/* $ORIGDIR/output/ | |
+ | |
+echo "End at `date`" | |
diff --git a/python/halfshear-darcy-velfac1.sh b/python/halfshear-darcy-velfac1… | |
t@@ -0,0 +1,50 @@ | |
+#!/bin/sh | |
+#PBS -N hs-d-v1 | |
+#PBS -l nodes=1:ppn=3 | |
+#PBS -l walltime=48:00:00 | |
+#PBS -q qfermi | |
+#PBS -M [email protected] | |
+#PBS -m abe | |
+ | |
+# Grendel CUDA | |
+source /com/gcc/4.6.4/load.sh | |
+CUDAPATH=/com/cuda/5.5.22 | |
+export PATH=$HOME/bin:$PATH | |
+export PATH=$CUDAPATH/bin:$PATH | |
+export LD_LIBRARY_PATH=$CUDAPATH/lib64:$CUDAPATH/lib:$LD_LIBRARY_PATH | |
+ | |
+# Manually installed Python modules | |
+export PYTHONPATH=$HOME/.local/lib/python:$PYTHONPATH | |
+export PYTHONPATH=$HOME/.local/lib64/python:$PYTHONPATH | |
+ | |
+# Manually installed Python | |
+#export PATH=/home/adc/.local/bin:$PATH | |
+ | |
+# Shared Python2.7 | |
+PYTHON=/com/python/2.7.6 | |
+export PYTHONPATH=$PYTHON/lib:$PYTHONPATH | |
+export PATH=$PYTHON/bin:$PATH | |
+ | |
+echo "`whoami`@`hostname`" | |
+echo "Start at `date`" | |
+ | |
+ORIGDIR=/home/adc/code/sphere | |
+#WORKDIR=/scratch/$PBS_JOBID | |
+WORKDIR=$ORIGDIR | |
+ | |
+#cp -r $ORIGDIR/* $WORKDIR | |
+ | |
+cd $WORKDIR | |
+nvidia-smi | |
+rm CMakeCache.txt | |
+cmake . && make | |
+cd python | |
+# $ python shear-starter.py <DEVICE> <FLUID> <C_PHI> <C_GRAD_P> <SIGMA_0> | |
+python halfshear-darcy-starter.py 0 1 1.0 3.5e-13 20000.0 1.797e-6 1.0 & | |
+python halfshear-darcy-starter.py 1 1 1.0 3.5e-14 20000.0 1.797e-6 1.0 & | |
+python halfshear-darcy-starter.py 2 1 1.0 3.5e-15 20000.0 1.797e-6 1.0 & | |
+wait | |
+ | |
+#cp $WORKDIR/output/* $ORIGDIR/output/ | |
+ | |
+echo "End at `date`" | |
diff --git a/python/halfshear-darcy-velfac2.sh b/python/halfshear-darcy-velfac2… | |
t@@ -0,0 +1,50 @@ | |
+#!/bin/sh | |
+#PBS -N hs-d-v2 | |
+#PBS -l nodes=1:ppn=3 | |
+#PBS -l walltime=48:00:00 | |
+#PBS -q qfermi | |
+#PBS -M [email protected] | |
+#PBS -m abe | |
+ | |
+# Grendel CUDA | |
+source /com/gcc/4.6.4/load.sh | |
+CUDAPATH=/com/cuda/5.5.22 | |
+export PATH=$HOME/bin:$PATH | |
+export PATH=$CUDAPATH/bin:$PATH | |
+export LD_LIBRARY_PATH=$CUDAPATH/lib64:$CUDAPATH/lib:$LD_LIBRARY_PATH | |
+ | |
+# Manually installed Python modules | |
+export PYTHONPATH=$HOME/.local/lib/python:$PYTHONPATH | |
+export PYTHONPATH=$HOME/.local/lib64/python:$PYTHONPATH | |
+ | |
+# Manually installed Python | |
+#export PATH=/home/adc/.local/bin:$PATH | |
+ | |
+# Shared Python2.7 | |
+PYTHON=/com/python/2.7.6 | |
+export PYTHONPATH=$PYTHON/lib:$PYTHONPATH | |
+export PATH=$PYTHON/bin:$PATH | |
+ | |
+echo "`whoami`@`hostname`" | |
+echo "Start at `date`" | |
+ | |
+ORIGDIR=/home/adc/code/sphere | |
+#WORKDIR=/scratch/$PBS_JOBID | |
+WORKDIR=$ORIGDIR | |
+ | |
+#cp -r $ORIGDIR/* $WORKDIR | |
+ | |
+cd $WORKDIR | |
+nvidia-smi | |
+rm CMakeCache.txt | |
+cmake . && make | |
+cd python | |
+# $ python shear-starter.py <DEVICE> <FLUID> <C_PHI> <C_GRAD_P> <SIGMA_0> | |
+python halfshear-darcy-starter.py 0 1 1.0 3.5e-13 20000.0 1.797e-6 2.0 & | |
+python halfshear-darcy-starter.py 1 1 1.0 3.5e-14 20000.0 1.797e-6 2.0 & | |
+python halfshear-darcy-starter.py 2 1 1.0 3.5e-15 20000.0 1.797e-6 2.0 & | |
+wait | |
+ | |
+#cp $WORKDIR/output/* $ORIGDIR/output/ | |
+ | |
+echo "End at `date`" |