tadd Torque job scripts for two examples - sphere - GPU-based 3D discrete eleme… | |
git clone git://src.adamsgaard.dk/sphere | |
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LICENSE | |
--- | |
commit 611042bd2970fd5ea7684e222c94c73b52174b07 | |
parent 076d803cd410527527159eb2ca7baffd906e4cba | |
Author: Anders Damsgaard <[email protected]> | |
Date: Fri, 4 Jul 2014 15:08:46 +0200 | |
add Torque job scripts for two examples | |
Diffstat: | |
A python/cube-init.sh | 49 +++++++++++++++++++++++++++++… | |
A python/permeability.sh | 49 +++++++++++++++++++++++++++++… | |
2 files changed, 98 insertions(+), 0 deletions(-) | |
--- | |
diff --git a/python/cube-init.sh b/python/cube-init.sh | |
t@@ -0,0 +1,49 @@ | |
+#!/bin/sh | |
+#PBS -N cube-init | |
+#PBS -l nodes=1:ppn=1 | |
+#PBS -l walltime=1920:00:00 | |
+#PBS -q qfermi | |
+#PBS -M [email protected] | |
+#PBS -m abe | |
+ | |
+# Grendel CUDA | |
+source /com/gcc/4.6.4/load.sh | |
+CUDAPATH=/com/cuda/5.5.22 | |
+export PATH=$HOME/bin:$PATH | |
+export PATH=$CUDAPATH/bin:$PATH | |
+export LD_LIBRARY_PATH=$CUDAPATH/lib64:$CUDAPATH/lib:$LD_LIBRARY_PATH | |
+ | |
+# Manually installed Python modules | |
+export PYTHONPATH=$HOME/.local/lib/python:$PYTHONPATH | |
+export PYTHONPATH=$HOME/.local/lib64/python:$PYTHONPATH | |
+ | |
+# Manually installed Python | |
+#export PATH=/home/adc/.local/bin:$PATH | |
+ | |
+# Shared Python2.7 | |
+PYTHON=/com/python/2.7.6 | |
+export PYTHONPATH=$PYTHON/lib:$PYTHONPATH | |
+export PATH=$PYTHON/bin:$PATH | |
+ | |
+echo "`whoami`@`hostname`" | |
+echo "Start at `date`" | |
+ | |
+ORIGDIR=/home/adc/code/sphere | |
+#WORKDIR=/scratch/$PBS_JOBID | |
+WORKDIR=$ORIGDIR | |
+ | |
+#cp -r $ORIGDIR/* $WORKDIR | |
+ | |
+cd $WORKDIR | |
+nvidia-smi | |
+rm CMakeCache.txt | |
+cmake . && make && make test | |
+cd python | |
+python cube-init.py & | |
+#python varN.py 0.2 & | |
+#python varN.py 0.5 & | |
+wait | |
+ | |
+#cp $WORKDIR/output/* $ORIGDIR/output/ | |
+ | |
+echo "End at `date`" | |
diff --git a/python/permeability.sh b/python/permeability.sh | |
t@@ -0,0 +1,49 @@ | |
+#!/bin/sh | |
+#PBS -N permeability | |
+#PBS -l nodes=1:ppn=3 | |
+#PBS -l walltime=1920:00:00 | |
+#PBS -q qfermi | |
+#PBS -M [email protected] | |
+#PBS -m abe | |
+ | |
+# Grendel CUDA | |
+source /com/gcc/4.6.4/load.sh | |
+CUDAPATH=/com/cuda/5.5.22 | |
+export PATH=$HOME/bin:$PATH | |
+export PATH=$CUDAPATH/bin:$PATH | |
+export LD_LIBRARY_PATH=$CUDAPATH/lib64:$CUDAPATH/lib:$LD_LIBRARY_PATH | |
+ | |
+# Manually installed Python modules | |
+export PYTHONPATH=$HOME/.local/lib/python:$PYTHONPATH | |
+export PYTHONPATH=$HOME/.local/lib64/python:$PYTHONPATH | |
+ | |
+# Manually installed Python | |
+#export PATH=/home/adc/.local/bin:$PATH | |
+ | |
+# Shared Python2.7 | |
+PYTHON=/com/python/2.7.6 | |
+export PYTHONPATH=$PYTHON/lib:$PYTHONPATH | |
+export PATH=$PYTHON/bin:$PATH | |
+ | |
+echo "`whoami`@`hostname`" | |
+echo "Start at `date`" | |
+ | |
+ORIGDIR=/home/adc/code/sphere | |
+#WORKDIR=/scratch/$PBS_JOBID | |
+WORKDIR=$ORIGDIR | |
+ | |
+#cp -r $ORIGDIR/* $WORKDIR | |
+ | |
+cd $WORKDIR | |
+nvidia-smi | |
+rm CMakeCache.txt | |
+cmake . && make && make test | |
+cd python | |
+python permeability1.py & | |
+python permeability2.py & | |
+python permeability3.py & | |
+wait | |
+ | |
+#cp $WORKDIR/output/* $ORIGDIR/output/ | |
+ | |
+echo "End at `date`" |