<?xml version="1.0" encoding="UTF-8"?>
<feed xmlns="http://www.w3.org/2005/Atom">
<title>pism, branch HEAD</title>
<subtitle>[fork] customized build of PISM, the parallel ice sheet model (tillflux branch)
</subtitle>
<entry>
<id>dad024795dc213a84981f884be6ccd16cf9fadcb</id>
<published>2021-08-05T00:01:10Z</published>
<updated>2021-08-05T00:01:10Z</updated>
<title type="text">Fix antspin-coarse.sh</title>
<link rel="alternate" href="commit/dad024795dc213a84981f884be6ccd16cf9fadcb.gph" />
<author>
<name>Kyle Blum</name>
<email>[email protected]</email>
</author>
<content type="text">commit dad024795dc213a84981f884be6ccd16cf9fadcb
parent b11f1d247514cea4cf07c1af5d367869701e4083
Author: Kyle Blum &lt;[email protected]&gt;
Date:   Wed,  4 Aug 2021 16:01:10 -0800

Fix antspin-coarse.sh

Added missing option bootstrap and Lz 5000 to the course simulation.

</content>
</entry>
<entry>
<id>b11f1d247514cea4cf07c1af5d367869701e4083</id>
<published>2021-06-14T00:39:44Z</published>
<updated>2021-06-14T00:39:44Z</updated>
<title type="text">Add .deepsource.toml</title>
<link rel="alternate" href="commit/b11f1d247514cea4cf07c1af5d367869701e4083.gph" />
<author>
<name>DeepSource Bot</name>
<email>[email protected]</email>
</author>
<content type="text">commit b11f1d247514cea4cf07c1af5d367869701e4083
parent 7d463673b0d1a89b0a43af1185bbd31277f40251
Author: DeepSource Bot &lt;[email protected]&gt;
Date:   Mon, 14 Jun 2021 00:39:44 +0000

Add .deepsource.toml
</content>
</entry>
<entry>
<id>7d463673b0d1a89b0a43af1185bbd31277f40251</id>
<published>2020-08-28T20:22:53Z</published>
<updated>2020-08-28T20:22:53Z</updated>
<title type="text">Update PISM version to 1.2.2</title>
<link rel="alternate" href="commit/7d463673b0d1a89b0a43af1185bbd31277f40251.gph" />
<author>
<name>Constantine Khrulev</name>
<email>[email protected]</email>
</author>
<content type="text">commit 7d463673b0d1a89b0a43af1185bbd31277f40251
parent d9e2d5c0bc4ec324cee8babff2f4e0c8bd33096a
Author: Constantine Khrulev &lt;[email protected]&gt;
Date:   Fri, 28 Aug 2020 12:22:53 -0800

Update PISM version to 1.2.2

</content>
</entry>
<entry>
<id>d9e2d5c0bc4ec324cee8babff2f4e0c8bd33096a</id>
<published>2020-08-28T19:59:24Z</published>
<updated>2020-08-28T19:59:24Z</updated>
<title type="text">Merge branch &#39;v1.2-bug-fixes&#39;</title>
<link rel="alternate" href="commit/d9e2d5c0bc4ec324cee8babff2f4e0c8bd33096a.gph" />
<author>
<name>Constantine Khrulev</name>
<email>[email protected]</email>
</author>
<content type="text">commit d9e2d5c0bc4ec324cee8babff2f4e0c8bd33096a
parent 5e1debde2dcc69dfb966e8dec7a58963f1967caf
Author: Constantine Khrulev &lt;[email protected]&gt;
Date:   Fri, 28 Aug 2020 11:59:24 -0800

Merge branch &#39;v1.2-bug-fixes&#39;

</content>
</entry>
<entry>
<id>4d0ebdcceb6da55f4397d68cec11d4743f952957</id>
<published>2020-08-19T17:35:45Z</published>
<updated>2020-08-19T17:37:58Z</updated>
<title type="text">Fix a bug that made it impossible to use Hayhurst calving</title>
<link rel="alternate" href="commit/4d0ebdcceb6da55f4397d68cec11d4743f952957.gph" />
<author>
<name>Constantine Khrulev</name>
<email>[email protected]</email>
</author>
<content type="text">commit 4d0ebdcceb6da55f4397d68cec11d4743f952957
parent a46f77062845571bdb0439b30042f8424aa5fc2b
Author: Constantine Khrulev &lt;[email protected]&gt;
Date:   Wed, 19 Aug 2020 09:35:45 -0800

Fix a bug that made it impossible to use Hayhurst calving

We need to remember to allocate the front retreat mechanism.

Reported by Sebastian Hinck.

</content>
</entry>
<entry>
<id>a46f77062845571bdb0439b30042f8424aa5fc2b</id>
<published>2020-07-22T23:45:17Z</published>
<updated>2020-07-23T00:00:46Z</updated>
<title type="text">Update the change log</title>
<link rel="alternate" href="commit/a46f77062845571bdb0439b30042f8424aa5fc2b.gph" />
<author>
<name>Constantine Khrulev</name>
<email>[email protected]</email>
</author>
<content type="text">commit a46f77062845571bdb0439b30042f8424aa5fc2b
parent c3188be25e2908d104115fb8d523ea050e3fccce
Author: Constantine Khrulev &lt;[email protected]&gt;
Date:   Wed, 22 Jul 2020 15:45:17 -0800

Update the change log

</content>
</entry>
<entry>
<id>c3188be25e2908d104115fb8d523ea050e3fccce</id>
<published>2020-07-22T20:01:32Z</published>
<updated>2020-07-23T00:00:46Z</updated>
<title type="text">Fix #462 (Asymmetry in subgl code)</title>
<link rel="alternate" href="commit/c3188be25e2908d104115fb8d523ea050e3fccce.gph" />
<author>
<name>Constantine Khrulev</name>
<email>[email protected]</email>
</author>
<content type="text">commit c3188be25e2908d104115fb8d523ea050e3fccce
parent 75e4e434ea071e1805d070549fc573619351d5b9
Author: Constantine Khrulev &lt;[email protected]&gt;
Date:   Wed, 22 Jul 2020 12:01:32 -0800

Fix #462 (Asymmetry in subgl code)

An one-character typo resulted in asymmetric results given symmetric inputs.

</content>
</entry>
<entry>
<id>75e4e434ea071e1805d070549fc573619351d5b9</id>
<published>2020-07-22T23:16:10Z</published>
<updated>2020-07-23T00:00:46Z</updated>
<title type="text">Use time.time() instead of time.clock() (which is deprecated)</title>
<link rel="alternate" href="commit/75e4e434ea071e1805d070549fc573619351d5b9.gph" />
<author>
<name>Constantine Khrulev</name>
<email>[email protected]</email>
</author>
<content type="text">commit 75e4e434ea071e1805d070549fc573619351d5b9
parent eaaa9d4e5c2ebd11318cba1c1a6ef4ab88e2462e
Author: Constantine Khrulev &lt;[email protected]&gt;
Date:   Wed, 22 Jul 2020 15:16:10 -0800

Use time.time() instead of time.clock() (which is deprecated)

</content>
</entry>
<entry>
<id>eaaa9d4e5c2ebd11318cba1c1a6ef4ab88e2462e</id>
<published>2020-06-12T19:46:23Z</published>
<updated>2020-07-23T00:00:46Z</updated>
<title type="text">Fix an error caught by Clang 10.0</title>
<link rel="alternate" href="commit/eaaa9d4e5c2ebd11318cba1c1a6ef4ab88e2462e.gph" />
<author>
<name>Constantine Khrulev</name>
<email>[email protected]</email>
</author>
<content type="text">commit eaaa9d4e5c2ebd11318cba1c1a6ef4ab88e2462e
parent ae6e5bc2734c36ae3996532b0d8eada07a4addce
Author: Constantine Khrulev &lt;[email protected]&gt;
Date:   Fri, 12 Jun 2020 11:46:23 -0800

Fix an error caught by Clang 10.0

Here get_name() returns a string that is discarded immediately. This means that the
pointer returned by get_name().c_str() is dangling.

</content>
</entry>
<entry>
<id>ae6e5bc2734c36ae3996532b0d8eada07a4addce</id>
<published>2020-06-12T19:21:44Z</published>
<updated>2020-07-23T00:00:46Z</updated>
<title type="text">Disable warnings caused by OpenMPI in CircleCI builds</title>
<link rel="alternate" href="commit/ae6e5bc2734c36ae3996532b0d8eada07a4addce.gph" />
<author>
<name>Constantine Khrulev</name>
<email>[email protected]</email>
</author>
<content type="text">commit ae6e5bc2734c36ae3996532b0d8eada07a4addce
parent 4817b87e4b02d7c0deaa96ff779e5fbcf935fa26
Author: Constantine Khrulev &lt;[email protected]&gt;
Date:   Fri, 12 Jun 2020 11:21:44 -0800

Disable warnings caused by OpenMPI in CircleCI builds

OpenMPI 4.0.3 assumes that __STDC_VERSION__ is always defined, which is not true.

</content>
</entry>
<entry>
<id>4817b87e4b02d7c0deaa96ff779e5fbcf935fa26</id>
<published>2020-06-11T22:11:13Z</published>
<updated>2020-07-23T00:00:46Z</updated>
<title type="text">Update the code to support newer GCC (v9.3 on Ubuntu 20.04)</title>
<link rel="alternate" href="commit/4817b87e4b02d7c0deaa96ff779e5fbcf935fa26.gph" />
<author>
<name>Constantine Khrulev</name>
<email>[email protected]</email>
</author>
<content type="text">commit 4817b87e4b02d7c0deaa96ff779e5fbcf935fa26
parent 438c2f512418d9c036e2c6f70802773b50ec2fee
Author: Constantine Khrulev &lt;[email protected]&gt;
Date:   Thu, 11 Jun 2020 14:11:13 -0800

Update the code to support newer GCC (v9.3 on Ubuntu 20.04)

- Remove the SpatialVariableMetadata copy constructor
- Don&#39;t use an enum constant in a boolean context
- Add the pism::Vector2 copy constructor

</content>
</entry>
<entry>
<id>438c2f512418d9c036e2c6f70802773b50ec2fee</id>
<published>2020-06-11T20:54:08Z</published>
<updated>2020-07-23T00:00:46Z</updated>
<title type="text">Use Ubuntu 20.04 LTS for regression tests</title>
<link rel="alternate" href="commit/438c2f512418d9c036e2c6f70802773b50ec2fee.gph" />
<author>
<name>Constantine Khrulev</name>
<email>[email protected]</email>
</author>
<content type="text">commit 438c2f512418d9c036e2c6f70802773b50ec2fee
parent 1c6691484254894eebe1257a5639a2daff87f0c0
Author: Constantine Khrulev &lt;[email protected]&gt;
Date:   Thu, 11 Jun 2020 12:54:08 -0800

Use Ubuntu 20.04 LTS for regression tests

</content>
</entry>
<entry>
<id>1c6691484254894eebe1257a5639a2daff87f0c0</id>
<published>2020-06-11T16:59:22Z</published>
<updated>2020-07-23T00:00:46Z</updated>
<title type="text">We should require PROJ &gt;= 6.0 instead of PROJ &gt;= 5.0</title>
<link rel="alternate" href="commit/1c6691484254894eebe1257a5639a2daff87f0c0.gph" />
<author>
<name>Constantine Khrulev</name>
<email>[email protected]</email>
</author>
<content type="text">commit 1c6691484254894eebe1257a5639a2daff87f0c0
parent ba178336570f847ec6035bd16bc593a4d8afaa08
Author: Constantine Khrulev &lt;[email protected]&gt;
Date:   Thu, 11 Jun 2020 08:59:22 -0800

We should require PROJ &gt;= 6.0 instead of PROJ &gt;= 5.0

The PROJ API used by PISM did not change between 5.x and 6.0, but the behavior did: some
things that work when linked to 5.x break with 6.x and vice versa.

I don&#39;t think supporting both versions is worth the effort.

</content>
</entry>
<entry>
<id>ba178336570f847ec6035bd16bc593a4d8afaa08</id>
<published>2020-06-09T17:54:09Z</published>
<updated>2020-07-23T00:00:46Z</updated>
<title type="text">Remove the Proj constructor calling proj_create()</title>
<link rel="alternate" href="commit/ba178336570f847ec6035bd16bc593a4d8afaa08.gph" />
<author>
<name>Constantine Khrulev</name>
<email>[email protected]</email>
</author>
<content type="text">commit ba178336570f847ec6035bd16bc593a4d8afaa08
parent 7bb118f6bfd2305867f0b4a5581769dd4b60e5c1
Author: Constantine Khrulev &lt;[email protected]&gt;
Date:   Tue,  9 Jun 2020 09:54:09 -0800

Remove the Proj constructor calling proj_create()

We use PROJ in PISM to create transformations from one coordinate system to a different
one. The constructor that creates a coordinate reference system itself is not needed.

</content>
</entry>
<entry>
<id>7bb118f6bfd2305867f0b4a5581769dd4b60e5c1</id>
<published>2020-06-09T17:52:17Z</published>
<updated>2020-07-23T00:00:46Z</updated>
<title type="text">Tell CMake not to warn about the use of PackageName_ROOT</title>
<link rel="alternate" href="commit/7bb118f6bfd2305867f0b4a5581769dd4b60e5c1.gph" />
<author>
<name>Constantine Khrulev</name>
<email>[email protected]</email>
</author>
<content type="text">commit 7bb118f6bfd2305867f0b4a5581769dd4b60e5c1
parent b154d04ea389c3b7673dbd9feec5fa5129c293a9
Author: Constantine Khrulev &lt;[email protected]&gt;
Date:   Tue,  9 Jun 2020 09:52:17 -0800

Tell CMake not to warn about the use of PackageName_ROOT

CMake &gt;= 3.12 uses PackageName_ROOT in find_package(). This commit suppresses warnings
about our FindXXX CMake scripts using these variables (PROJ_ROOT, GSL_ROOT, etc).

</content>
</entry>
<entry>
<id>b154d04ea389c3b7673dbd9feec5fa5129c293a9</id>
<published>2020-06-04T04:27:24Z</published>
<updated>2020-06-04T04:27:24Z</updated>
<title type="text">Support PROJ 6.x properly</title>
<link rel="alternate" href="commit/b154d04ea389c3b7673dbd9feec5fa5129c293a9.gph" />
<author>
<name>Constantine Khrulev</name>
<email>[email protected]</email>
</author>
<content type="text">commit b154d04ea389c3b7673dbd9feec5fa5129c293a9
parent 88c4572aa7a31ee365dcb7141a3b9659c53eb066
Author: Constantine Khrulev &lt;[email protected]&gt;
Date:   Wed,  3 Jun 2020 20:27:24 -0800

Support PROJ 6.x properly

Now that we support proj=&quot;EPSG:XXXX&quot; to initialize projection info we have to be careful
about this PROJ quirk: &quot;+init=epsg:XXXX&quot; creates a *transformation* and &quot;epsg:XXXX&quot;
creates a coordinate reference system.

I think we just need to create a transformation from a given CRS to lat,lon (EPGS:4326)
and use that.

</content>
</entry>
<entry>
<id>88c4572aa7a31ee365dcb7141a3b9659c53eb066</id>
<published>2020-06-04T03:58:19Z</published>
<updated>2020-06-04T04:13:02Z</updated>
<title type="text">Support both &quot;+init=epsg:XXXX&quot; and &quot;epsg:XXXX&quot;</title>
<link rel="alternate" href="commit/88c4572aa7a31ee365dcb7141a3b9659c53eb066.gph" />
<author>
<name>Constantine Khrulev</name>
<email>[email protected]</email>
</author>
<content type="text">commit 88c4572aa7a31ee365dcb7141a3b9659c53eb066
parent 006c3271e04dcd3643f7fe25181ea6720fc6c93c
Author: Constantine Khrulev &lt;[email protected]&gt;
Date:   Wed,  3 Jun 2020 19:58:19 -0800

Support both &quot;+init=epsg:XXXX&quot; and &quot;epsg:XXXX&quot;

PROJ 6.3 (I think) and newer no longer supports the old syntax for creating CRS using an
EPSG code. This commit updates PISM&#39;s code processing the global attribute &quot;proj&quot; to
create CF-conforming &quot;mapping&quot; variables for supported EPSG codes: now we support both old
and new ways.

</content>
</entry>
<entry>
<id>006c3271e04dcd3643f7fe25181ea6720fc6c93c</id>
<published>2020-05-29T01:01:51Z</published>
<updated>2020-06-01T20:58:08Z</updated>
<title type="text">Look for 1) Python 3 in Circle CI builds and 2) nosetests3</title>
<link rel="alternate" href="commit/006c3271e04dcd3643f7fe25181ea6720fc6c93c.gph" />
<author>
<name>Constantine Khrulev</name>
<email>[email protected]</email>
</author>
<content type="text">commit 006c3271e04dcd3643f7fe25181ea6720fc6c93c
parent 30228714ad2ba51b3c588e8073c084e8587d85aa
Author: Constantine Khrulev &lt;[email protected]&gt;
Date:   Thu, 28 May 2020 17:01:51 -0800

Look for 1) Python 3 in Circle CI builds and 2) nosetests3

</content>
</entry>
<entry>
<id>30228714ad2ba51b3c588e8073c084e8587d85aa</id>
<published>2020-05-28T22:23:07Z</published>
<updated>2020-06-01T20:58:08Z</updated>
<title type="text">Use python3 in regression tests</title>
<link rel="alternate" href="commit/30228714ad2ba51b3c588e8073c084e8587d85aa.gph" />
<author>
<name>Constantine Khrulev</name>
<email>[email protected]</email>
</author>
<content type="text">commit 30228714ad2ba51b3c588e8073c084e8587d85aa
parent 9579f0c353e8647f139f9c396e3b3c8b1be64616
Author: Constantine Khrulev &lt;[email protected]&gt;
Date:   Thu, 28 May 2020 14:23:07 -0800

Use python3 in regression tests

</content>
</entry>
<entry>
<id>9579f0c353e8647f139f9c396e3b3c8b1be64616</id>
<published>2020-05-28T21:52:34Z</published>
<updated>2020-06-01T20:58:08Z</updated>
<title type="text">Add python3-dev to the list of packages and sort the list</title>
<link rel="alternate" href="commit/9579f0c353e8647f139f9c396e3b3c8b1be64616.gph" />
<author>
<name>Constantine Khrulev</name>
<email>[email protected]</email>
</author>
<content type="text">commit 9579f0c353e8647f139f9c396e3b3c8b1be64616
parent c443afb6dd165bcea94ad739729dd7a51b2b38ad
Author: Constantine Khrulev &lt;[email protected]&gt;
Date:   Thu, 28 May 2020 13:52:34 -0800

Add python3-dev to the list of packages and sort the list

</content>
</entry>
<entry>
<id>c443afb6dd165bcea94ad739729dd7a51b2b38ad</id>
<published>2020-05-28T21:52:01Z</published>
<updated>2020-06-01T20:58:08Z</updated>
<title type="text">Fix the Python3 shebang in the rest of the scripts</title>
<link rel="alternate" href="commit/c443afb6dd165bcea94ad739729dd7a51b2b38ad.gph" />
<author>
<name>Constantine Khrulev</name>
<email>[email protected]</email>
</author>
<content type="text">commit c443afb6dd165bcea94ad739729dd7a51b2b38ad
parent 91d3f6b7ba0c267ecb120d63a9609f25bbed3a90
Author: Constantine Khrulev &lt;[email protected]&gt;
Date:   Thu, 28 May 2020 13:52:01 -0800

Fix the Python3 shebang in the rest of the scripts

</content>
</entry>
<entry>
<id>91d3f6b7ba0c267ecb120d63a9609f25bbed3a90</id>
<published>2020-05-27T20:11:10Z</published>
<updated>2020-06-01T20:58:08Z</updated>
<title type="text">Update the Docker image used by Circle CI</title>
<link rel="alternate" href="commit/91d3f6b7ba0c267ecb120d63a9609f25bbed3a90.gph" />
<author>
<name>Constantine Khrulev</name>
<email>[email protected]</email>
</author>
<content type="text">commit 91d3f6b7ba0c267ecb120d63a9609f25bbed3a90
parent b9139572ddfbb8a70232048b4d96873a18486bcc
Author: Constantine Khrulev &lt;[email protected]&gt;
Date:   Wed, 27 May 2020 12:11:10 -0800

Update the Docker image used by Circle CI

This image version (0.1.3) installs python3-* packages instead of python-*.

</content>
</entry>
<entry>
<id>b9139572ddfbb8a70232048b4d96873a18486bcc</id>
<published>2020-05-27T20:06:38Z</published>
<updated>2020-06-01T20:58:08Z</updated>
<title type="text">Remove an outdated script</title>
<link rel="alternate" href="commit/b9139572ddfbb8a70232048b4d96873a18486bcc.gph" />
<author>
<name>Constantine Khrulev</name>
<email>[email protected]</email>
</author>
<content type="text">commit b9139572ddfbb8a70232048b4d96873a18486bcc
parent c693d146ae926338af81e2d22bb52c014ab602d8
Author: Constantine Khrulev &lt;[email protected]&gt;
Date:   Wed, 27 May 2020 12:06:38 -0800

Remove an outdated script

</content>
</entry>
<entry>
<id>c693d146ae926338af81e2d22bb52c014ab602d8</id>
<published>2020-06-01T20:56:57Z</published>
<updated>2020-06-01T20:58:08Z</updated>
<title type="text">Fix minimal NetCDF version supported by PISM (4.4 and not 4.1)</title>
<link rel="alternate" href="commit/c693d146ae926338af81e2d22bb52c014ab602d8.gph" />
<author>
<name>Constantine Khrulev</name>
<email>[email protected]</email>
</author>
<content type="text">commit c693d146ae926338af81e2d22bb52c014ab602d8
parent ca73874f4607ec47b3f5e9571665f2bffc876b04
Author: Constantine Khrulev &lt;[email protected]&gt;
Date:   Mon,  1 Jun 2020 12:56:57 -0800

Fix minimal NetCDF version supported by PISM (4.4 and not 4.1)

Note: NetCDF 4.4.0 is over 4 years old.

</content>
</entry>
<entry>
<id>ca73874f4607ec47b3f5e9571665f2bffc876b04</id>
<published>2020-05-27T19:10:59Z</published>
<updated>2020-05-27T19:10:59Z</updated>
<title type="text">Update the change log</title>
<link rel="alternate" href="commit/ca73874f4607ec47b3f5e9571665f2bffc876b04.gph" />
<author>
<name>Constantine Khrulev</name>
<email>[email protected]</email>
</author>
<content type="text">commit ca73874f4607ec47b3f5e9571665f2bffc876b04
parent 4466045f455047595fb3bb4f6c0eead0968d9524
Author: Constantine Khrulev &lt;[email protected]&gt;
Date:   Wed, 27 May 2020 11:10:59 -0800

Update the change log

</content>
</entry>
<entry>
<id>4466045f455047595fb3bb4f6c0eead0968d9524</id>
<published>2020-05-27T18:43:00Z</published>
<updated>2020-05-27T18:43:00Z</updated>
<title type="text">Use &quot;#!/usr/bin/env python3&quot; in Python scripts</title>
<link rel="alternate" href="commit/4466045f455047595fb3bb4f6c0eead0968d9524.gph" />
<author>
<name>Constantine Khrulev</name>
<email>[email protected]</email>
</author>
<content type="text">commit 4466045f455047595fb3bb4f6c0eead0968d9524
parent 48c4b868b82ca926138f9d1764117c1225137afd
Author: Constantine Khrulev &lt;[email protected]&gt;
Date:   Wed, 27 May 2020 10:43:00 -0800

Use &quot;#!/usr/bin/env python3&quot; in Python scripts

See PEP 394 -- The &quot;python&quot; Command on Unix-Like Systems

Python runtime distributions should provide executables python2 (Python version 2.x) and
python3 (3.x). We do not intend to maintain Python 2.x compatibility, so switching to
python3 makes sense.

</content>
</entry>
<entry>
<id>48c4b868b82ca926138f9d1764117c1225137afd</id>
<published>2020-05-27T18:40:42Z</published>
<updated>2020-05-27T18:40:42Z</updated>
<title type="text">Use &quot;python3-&quot; instead of &quot;python-&quot; in the list of required packages</title>
<link rel="alternate" href="commit/48c4b868b82ca926138f9d1764117c1225137afd.gph" />
<author>
<name>Constantine Khrulev</name>
<email>[email protected]</email>
</author>
<content type="text">commit 48c4b868b82ca926138f9d1764117c1225137afd
parent a6df37fdc6fff2a4310db1373f1b178ac7fd1c1e
Author: Constantine Khrulev &lt;[email protected]&gt;
Date:   Wed, 27 May 2020 10:40:42 -0800

Use &quot;python3-&quot; instead of &quot;python-&quot; in the list of required packages

Ubuntu 20.04 uses the python3- prefix and does *not* provide packages with old names.

</content>
</entry>
<entry>
<id>a6df37fdc6fff2a4310db1373f1b178ac7fd1c1e</id>
<published>2020-05-11T22:15:50Z</published>
<updated>2020-05-11T22:17:00Z</updated>
<title type="text">von Mises calving: apply at both floating and grounded ice fronts</title>
<link rel="alternate" href="commit/a6df37fdc6fff2a4310db1373f1b178ac7fd1c1e.gph" />
<author>
<name>Constantine Khrulev</name>
<email>[email protected]</email>
</author>
<content type="text">commit a6df37fdc6fff2a4310db1373f1b178ac7fd1c1e
parent e0a29ab238c21a6f21544dcab91d09fcb893cad5
Author: Constantine Khrulev &lt;[email protected]&gt;
Date:   Mon, 11 May 2020 14:15:50 -0800

von Mises calving: apply at both floating and grounded ice fronts

</content>
</entry>
<entry>
<id>e0a29ab238c21a6f21544dcab91d09fcb893cad5</id>
<published>2020-05-11T20:43:17Z</published>
<updated>2020-05-11T22:16:53Z</updated>
<title type="text">Poisson: add zero Neumann BC at arbitrary locations</title>
<link rel="alternate" href="commit/e0a29ab238c21a6f21544dcab91d09fcb893cad5.gph" />
<author>
<name>Constantine Khrulev</name>
<email>[email protected]</email>
</author>
<content type="text">commit e0a29ab238c21a6f21544dcab91d09fcb893cad5
parent 95a995e69274fb2e4002da567acffd55a7de2540
Author: Constantine Khrulev &lt;[email protected]&gt;
Date:   Mon, 11 May 2020 12:43:17 -0800

Poisson: add zero Neumann BC at arbitrary locations

</content>
</entry>
<entry>
<id>95a995e69274fb2e4002da567acffd55a7de2540</id>
<published>2020-05-07T00:07:34Z</published>
<updated>2020-05-11T22:16:46Z</updated>
<title type="text">Fix a typo in the manual</title>
<link rel="alternate" href="commit/95a995e69274fb2e4002da567acffd55a7de2540.gph" />
<author>
<name>Constantine Khrulev</name>
<email>[email protected]</email>
</author>
<content type="text">commit 95a995e69274fb2e4002da567acffd55a7de2540
parent 943b60de98752439b492e114ef0095aa5bf54c69
Author: Constantine Khrulev &lt;[email protected]&gt;
Date:   Wed,  6 May 2020 16:07:34 -0800

Fix a typo in the manual

</content>
</entry>
<entry>
<id>943b60de98752439b492e114ef0095aa5bf54c69</id>
<published>2020-05-11T17:42:34Z</published>
<updated>2020-05-11T17:42:34Z</updated>
<title type="text">Remove --class-qualify from etags arguments</title>
<link rel="alternate" href="commit/943b60de98752439b492e114ef0095aa5bf54c69.gph" />
<author>
<name>Constantine Khrulev</name>
<email>[email protected]</email>
</author>
<content type="text">commit 943b60de98752439b492e114ef0095aa5bf54c69
parent 5edfbf81779f2e488dd0925fc310e2b93d92deb6
Author: Constantine Khrulev &lt;[email protected]&gt;
Date:   Mon, 11 May 2020 09:42:34 -0800

Remove --class-qualify from etags arguments

</content>
</entry>
<entry>
<id>5edfbf81779f2e488dd0925fc310e2b93d92deb6</id>
<published>2020-05-05T21:29:55Z</published>
<updated>2020-05-05T21:29:55Z</updated>
<title type="text">Update the change log</title>
<link rel="alternate" href="commit/5edfbf81779f2e488dd0925fc310e2b93d92deb6.gph" />
<author>
<name>Constantine Khrulev</name>
<email>[email protected]</email>
</author>
<content type="text">commit 5edfbf81779f2e488dd0925fc310e2b93d92deb6
parent 9a204aefc4b843f2c5b5b10cc9faa9b253d68e0d
Author: Constantine Khrulev &lt;[email protected]&gt;
Date:   Tue,  5 May 2020 13:29:55 -0800

Update the change log

</content>
</entry>
<entry>
<id>9a204aefc4b843f2c5b5b10cc9faa9b253d68e0d</id>
<published>2020-05-05T21:14:45Z</published>
<updated>2020-05-05T21:14:45Z</updated>
<title type="text">Merge pull request #460 from m-kreuzer/master</title>
<link rel="alternate" href="commit/9a204aefc4b843f2c5b5b10cc9faa9b253d68e0d.gph" />
<author>
<name>Constantine Khrulev</name>
<email>[email protected]</email>
</author>
<content type="text">commit 9a204aefc4b843f2c5b5b10cc9faa9b253d68e0d
parent 5e1debde2dcc69dfb966e8dec7a58963f1967caf
Author: Constantine Khrulev &lt;[email protected]&gt;
Date:   Tue,  5 May 2020 13:14:45 -0800

Merge pull request #460 from m-kreuzer/master

replaced time.clock() as it is deprecated in python3.8
</content>
</entry>
<entry>
<id>f7d16e7edc7e7d07c837941135c0b324e551a861</id>
<published>2020-05-05T13:50:46Z</published>
<updated>2020-05-05T13:50:46Z</updated>
<title type="text">replaced time.clock() as it is deprecated in python3.8</title>
<link rel="alternate" href="commit/f7d16e7edc7e7d07c837941135c0b324e551a861.gph" />
<author>
<name>m-kreuzer</name>
<email>[email protected]</email>
</author>
<content type="text">commit f7d16e7edc7e7d07c837941135c0b324e551a861
parent 5e1debde2dcc69dfb966e8dec7a58963f1967caf
Author: m-kreuzer &lt;[email protected]&gt;
Date:   Tue,  5 May 2020 15:50:46 +0200

replaced time.clock() as it is deprecated in python3.8

</content>
</entry>
<entry>
<id>5e1debde2dcc69dfb966e8dec7a58963f1967caf</id>
<published>2020-03-20T04:48:37Z</published>
<updated>2020-03-20T04:48:37Z</updated>
<title type="text">Update PISM version to 1.2.1</title>
<link rel="alternate" href="commit/5e1debde2dcc69dfb966e8dec7a58963f1967caf.gph" />
<author>
<name>Constantine Khrulev</name>
<email>[email protected]</email>
</author>
<content type="text">commit 5e1debde2dcc69dfb966e8dec7a58963f1967caf
parent 4b59b0cee657e4cce09bede9d301d6ecc1b60a9d
Author: Constantine Khrulev &lt;[email protected]&gt;
Date:   Thu, 19 Mar 2020 20:48:37 -0800

Update PISM version to 1.2.1

</content>
</entry>
<entry>
<id>4b59b0cee657e4cce09bede9d301d6ecc1b60a9d</id>
<published>2020-03-20T04:47:49Z</published>
<updated>2020-03-20T04:47:49Z</updated>
<title type="text">Merge branch &#39;v1.2-bug-fixes&#39;</title>
<link rel="alternate" href="commit/4b59b0cee657e4cce09bede9d301d6ecc1b60a9d.gph" />
<author>
<name>Constantine Khrulev</name>
<email>[email protected]</email>
</author>
<content type="text">commit 4b59b0cee657e4cce09bede9d301d6ecc1b60a9d
parent 3e480b22a001a53b48befa2f95309c6b12f5a716
Author: Constantine Khrulev &lt;[email protected]&gt;
Date:   Thu, 19 Mar 2020 20:47:49 -0800

Merge branch &#39;v1.2-bug-fixes&#39;

</content>
</entry>
<entry>
<id>2d85d4d7bd682ec06ef3c23a29021f8ea6514b26</id>
<published>2020-03-18T21:20:15Z</published>
<updated>2020-03-18T21:53:33Z</updated>
<title type="text">Update the change log</title>
<link rel="alternate" href="commit/2d85d4d7bd682ec06ef3c23a29021f8ea6514b26.gph" />
<author>
<name>Constantine Khrulev</name>
<email>[email protected]</email>
</author>
<content type="text">commit 2d85d4d7bd682ec06ef3c23a29021f8ea6514b26
parent 8627f7684b620cc64110dd600ceed95879f613b4
Author: Constantine Khrulev &lt;[email protected]&gt;
Date:   Wed, 18 Mar 2020 13:20:15 -0800

Update the change log

</content>
</entry>
<entry>
<id>8627f7684b620cc64110dd600ceed95879f613b4</id>
<published>2020-03-18T21:12:52Z</published>
<updated>2020-03-18T21:15:17Z</updated>
<title type="text">Set stress_balance.ssa.fd.max_speed to about the speed of light</title>
<link rel="alternate" href="commit/8627f7684b620cc64110dd600ceed95879f613b4.gph" />
<author>
<name>Constantine Khrulev</name>
<email>[email protected]</email>
</author>
<content type="text">commit 8627f7684b620cc64110dd600ceed95879f613b4
parent 29e4efbbae0feb931d393e3015724a8c3b0752b9
Author: Constantine Khrulev &lt;[email protected]&gt;
Date:   Wed, 18 Mar 2020 13:12:52 -0800

Set stress_balance.ssa.fd.max_speed to about the speed of light

See #455 (Don&#39;t limit maximum speeds)

The default value of stress_balance.ssa.fd.max_speed should be high enough to disable this
mechanism.

</content>
</entry>
<entry>
<id>29e4efbbae0feb931d393e3015724a8c3b0752b9</id>
<published>2020-03-18T21:00:34Z</published>
<updated>2020-03-18T21:15:16Z</updated>
<title type="text">Use high basal yield stress in all ice-free areas</title>
<link rel="alternate" href="commit/29e4efbbae0feb931d393e3015724a8c3b0752b9.gph" />
<author>
<name>Constantine Khrulev</name>
<email>[email protected]</email>
</author>
<content type="text">commit 29e4efbbae0feb931d393e3015724a8c3b0752b9
parent d476adc6d7ffdda5d2ee9afe78011800817a115b
Author: Constantine Khrulev &lt;[email protected]&gt;
Date:   Wed, 18 Mar 2020 13:00:34 -0800

Use high basal yield stress in all ice-free areas

See #456 (Use high basal yield stress in &quot;ice-free ocean&quot; areas).

This should make PISM&#39;s stress balance solver a bit more robust.

The problem is: we use basal yield stress computed during the previous time step. The flow
of ice may create small &quot;ice caps&quot; at locations that were under water during the last time
step and so (before this change) had zero yield stress. This leads to failures of the SSA
solver: it cannot handle isolated patches of ice with no drag.

</content>
</entry>
<entry>
<id>d476adc6d7ffdda5d2ee9afe78011800817a115b</id>
<published>2020-03-05T20:18:13Z</published>
<updated>2020-03-05T20:20:18Z</updated>
<title type="text">Remove assert(T_s &lt; 0.0)</title>
<link rel="alternate" href="commit/d476adc6d7ffdda5d2ee9afe78011800817a115b.gph" />
<author>
<name>Constantine Khrulev</name>
<email>[email protected]</email>
</author>
<content type="text">commit d476adc6d7ffdda5d2ee9afe78011800817a115b
parent b37d50a7a49eb43d0ac52093a5cc3dad79e18b08
Author: Constantine Khrulev &lt;[email protected]&gt;
Date:   Thu,  5 Mar 2020 11:18:13 -0900

Remove assert(T_s &lt; 0.0)

See issue #454 (PICO initialization fails with dummy values).

This statement was put there to see if &quot;T_s &gt;= 0.0&quot; is possible. It turns out that it
does.

</content>
</entry>
<entry>
<id>b37d50a7a49eb43d0ac52093a5cc3dad79e18b08</id>
<published>2020-02-18T22:03:00Z</published>
<updated>2020-03-05T18:41:52Z</updated>
<title type="text">Remove the Python implementation of the orographic precipitation model</title>
<link rel="alternate" href="commit/b37d50a7a49eb43d0ac52093a5cc3dad79e18b08.gph" />
<author>
<name>Constantine Khrulev</name>
<email>[email protected]</email>
</author>
<content type="text">commit b37d50a7a49eb43d0ac52093a5cc3dad79e18b08
parent fda5e766e1ac6d279703586fceec56ef42c27c21
Author: Constantine Khrulev &lt;[email protected]&gt;
Date:   Tue, 18 Feb 2020 13:03:00 -0900

Remove the Python implementation of the orographic precipitation model

(cherry picked from commit 440115a3a43dc44925aa9f196b66ed0f7e24bca1)

</content>
</entry>
<entry>
<id>fda5e766e1ac6d279703586fceec56ef42c27c21</id>
<published>2020-03-05T18:31:36Z</published>
<updated>2020-03-05T18:41:52Z</updated>
<title type="text">Warn that some tests will not run because &quot;nose&quot; was not found</title>
<link rel="alternate" href="commit/fda5e766e1ac6d279703586fceec56ef42c27c21.gph" />
<author>
<name>Constantine Khrulev</name>
<email>[email protected]</email>
</author>
<content type="text">commit fda5e766e1ac6d279703586fceec56ef42c27c21
parent 8742fbfcd047ba064d2cc0eb344e56e1c1cd81a7
Author: Constantine Khrulev &lt;[email protected]&gt;
Date:   Thu,  5 Mar 2020 09:31:36 -0900

Warn that some tests will not run because &quot;nose&quot; was not found

</content>
</entry>
<entry>
<id>8742fbfcd047ba064d2cc0eb344e56e1c1cd81a7</id>
<published>2020-03-02T18:48:31Z</published>
<updated>2020-03-05T18:41:52Z</updated>
<title type="text">Add file name prefixes to avoid race conditions in regression tests</title>
<link rel="alternate" href="commit/8742fbfcd047ba064d2cc0eb344e56e1c1cd81a7.gph" />
<author>
<name>Constantine Khrulev</name>
<email>[email protected]</email>
</author>
<content type="text">commit 8742fbfcd047ba064d2cc0eb344e56e1c1cd81a7
parent 249992c4b043453329e3b6825f019e809d271832
Author: Constantine Khrulev &lt;[email protected]&gt;
Date:   Mon,  2 Mar 2020 09:48:31 -0900

Add file name prefixes to avoid race conditions in regression tests

</content>
</entry>
<entry>
<id>249992c4b043453329e3b6825f019e809d271832</id>
<published>2020-03-03T00:38:41Z</published>
<updated>2020-03-05T18:40:17Z</updated>
<title type="text">Update scripts using -front_retreat_file</title>
<link rel="alternate" href="commit/249992c4b043453329e3b6825f019e809d271832.gph" />
<author>
<name>Constantine Khrulev</name>
<email>[email protected]</email>
</author>
<content type="text">commit 249992c4b043453329e3b6825f019e809d271832
parent ed7145a2a2b7770891efeb249757b10f3e94de03
Author: Constantine Khrulev &lt;[email protected]&gt;
Date:   Mon,  2 Mar 2020 15:38:41 -0900

Update scripts using -front_retreat_file

- the std-greenland example
- the Jakobshavn example
- the searise-antarctica example
- the fracture density example
- MISMIP scripts
- the MISMIP3D example (it is still broken but does not use ocean_kill any more)

</content>
</entry>
<entry>
<id>ed7145a2a2b7770891efeb249757b10f3e94de03</id>
<published>2020-03-03T17:43:52Z</published>
<updated>2020-03-05T18:40:17Z</updated>
<title type="text">Stop if -ocean_kill_file is set</title>
<link rel="alternate" href="commit/ed7145a2a2b7770891efeb249757b10f3e94de03.gph" />
<author>
<name>Constantine Khrulev</name>
<email>[email protected]</email>
</author>
<content type="text">commit ed7145a2a2b7770891efeb249757b10f3e94de03
parent 3310ba8ad1d868c742095c9e7b60d30b0c846508
Author: Constantine Khrulev &lt;[email protected]&gt;
Date:   Tue,  3 Mar 2020 08:43:52 -0900

Stop if -ocean_kill_file is set

</content>
</entry>
<entry>
<id>3310ba8ad1d868c742095c9e7b60d30b0c846508</id>
<published>2020-03-03T23:23:21Z</published>
<updated>2020-03-05T18:39:16Z</updated>
<title type="text">Continue after the warning about missing &#39;units&#39;</title>
<link rel="alternate" href="commit/3310ba8ad1d868c742095c9e7b60d30b0c846508.gph" />
<author>
<name>Constantine Khrulev</name>
<email>[email protected]</email>
</author>
<content type="text">commit 3310ba8ad1d868c742095c9e7b60d30b0c846508
parent d077543bccd25417f4ba4de1ee30ef79cefd8912
Author: Constantine Khrulev &lt;[email protected]&gt;
Date:   Tue,  3 Mar 2020 14:23:21 -0900

Continue after the warning about missing &#39;units&#39;

When regridding a variable that does not have the &quot;units&quot; attribute PISM used to
1) warn that the &quot;units&quot; attribute is missing and then
2) stop with an error message saying something like &quot;cannot convert from &#39;m&#39; to &#39;&#39;&quot;.

This does not make sense: we should either warn or stop with an error message.

Now PISM warns that the &quot;units&quot; attribute is missing and assumes that units in the file
match PISM&#39;s (internal) units but *does not* stop.

</content>
</entry>
<entry>
<id>d077543bccd25417f4ba4de1ee30ef79cefd8912</id>
<published>2020-02-29T00:13:49Z</published>
<updated>2020-03-05T18:39:16Z</updated>
<title type="text">Mention that geometry.front_retreat.prescribed.file replaces ocean_kill</title>
<link rel="alternate" href="commit/d077543bccd25417f4ba4de1ee30ef79cefd8912.gph" />
<author>
<name>Constantine Khrulev</name>
<email>[email protected]</email>
</author>
<content type="text">commit d077543bccd25417f4ba4de1ee30ef79cefd8912
parent 84680d8e30ba61b97a3c4b5bfdd3ab437e730f47
Author: Constantine Khrulev &lt;[email protected]&gt;
Date:   Fri, 28 Feb 2020 15:13:49 -0900

Mention that geometry.front_retreat.prescribed.file replaces ocean_kill

</content>
</entry>
<entry>
<id>84680d8e30ba61b97a3c4b5bfdd3ab437e730f47</id>
<published>2020-02-29T00:13:11Z</published>
<updated>2020-03-05T18:39:01Z</updated>
<title type="text">Remove old unused code</title>
<link rel="alternate" href="commit/84680d8e30ba61b97a3c4b5bfdd3ab437e730f47.gph" />
<author>
<name>Constantine Khrulev</name>
<email>[email protected]</email>
</author>
<content type="text">commit 84680d8e30ba61b97a3c4b5bfdd3ab437e730f47
parent 0cca28b6c7775888549c25612d17ae4d45bc2e7f
Author: Constantine Khrulev &lt;[email protected]&gt;
Date:   Fri, 28 Feb 2020 15:13:11 -0900

Remove old unused code

(I should have done this a long time ago. I don&#39;t know how I missed it.)

</content>
</entry>
<entry>
<id>0cca28b6c7775888549c25612d17ae4d45bc2e7f</id>
<published>2020-02-27T22:06:12Z</published>
<updated>2020-03-03T23:28:57Z</updated>
<title type="text">Fix the orographic precipitation model</title>
<link rel="alternate" href="commit/0cca28b6c7775888549c25612d17ae4d45bc2e7f.gph" />
<author>
<name>Constantine Khrulev</name>
<email>[email protected]</email>
</author>
<content type="text">commit 0cca28b6c7775888549c25612d17ae4d45bc2e7f
parent 03fb7777988cb30f98a3141c85f3205d0bdee23f
Author: Constantine Khrulev &lt;[email protected]&gt;
Date:   Thu, 27 Feb 2020 13:06:12 -0900

Fix the orographic precipitation model

- The orographic precipitation model is a &quot;modifier&quot;, so it has to initialize, update, and
 begin/end point-wise access to the input model.
- Fix a units of background_precip_{pre,post} in OrographicPrecipitationSerial
- Fix unit conversion in OrographicPrecipitation

</content>
</entry>
<entry>
<id>03fb7777988cb30f98a3141c85f3205d0bdee23f</id>
<published>2020-02-17T21:53:53Z</published>
<updated>2020-02-17T21:53:53Z</updated>
<title type="text">Fix a bug in the fracture density test script</title>
<link rel="alternate" href="commit/03fb7777988cb30f98a3141c85f3205d0bdee23f.gph" />
<author>
<name>Constantine Khrulev</name>
<email>[email protected]</email>
</author>
<content type="text">commit 03fb7777988cb30f98a3141c85f3205d0bdee23f
parent ce9d97d7f7314ab95fbdce6d8e36351742673b48
Author: Constantine Khrulev &lt;[email protected]&gt;
Date:   Mon, 17 Feb 2020 12:53:53 -0900

Fix a bug in the fracture density test script

</content>
</entry>
<entry>
<id>ce9d97d7f7314ab95fbdce6d8e36351742673b48</id>
<published>2020-02-17T20:33:31Z</published>
<updated>2020-02-17T20:34:32Z</updated>
<title type="text">Fix a bug in fracture density code</title>
<link rel="alternate" href="commit/ce9d97d7f7314ab95fbdce6d8e36351742673b48.gph" />
<author>
<name>Constantine Khrulev</name>
<email>[email protected]</email>
</author>
<content type="text">commit ce9d97d7f7314ab95fbdce6d8e36351742673b48
parent 5b8576ad0cc16d061f9b3b0feaba33be59c49a2c
Author: Constantine Khrulev &lt;[email protected]&gt;
Date:   Mon, 17 Feb 2020 11:33:31 -0900

Fix a bug in fracture density code

(My fault: I should have tested if after a merge.)

</content>
</entry>
<entry>
<id>5b8576ad0cc16d061f9b3b0feaba33be59c49a2c</id>
<published>2020-02-14T23:11:19Z</published>
<updated>2020-02-14T23:12:21Z</updated>
<title type="text">Include &lt;cstdarg&gt; for va_list, va_start(), and va_end()</title>
<link rel="alternate" href="commit/5b8576ad0cc16d061f9b3b0feaba33be59c49a2c.gph" />
<author>
<name>Constantine Khrulev</name>
<email>[email protected]</email>
</author>
<content type="text">commit 5b8576ad0cc16d061f9b3b0feaba33be59c49a2c
parent eff41fc632d610dd9d746c84829746b938e70497
Author: Constantine Khrulev &lt;[email protected]&gt;
Date:   Fri, 14 Feb 2020 14:11:19 -0900

Include &lt;cstdarg&gt; for va_list, va_start(), and va_end()

</content>
</entry>
<entry>
<id>eff41fc632d610dd9d746c84829746b938e70497</id>
<published>2020-02-14T15:21:12Z</published>
<updated>2020-02-14T15:21:57Z</updated>
<title type="text">Use \gamma_{T,P,M} for different lapse rates in the manual</title>
<link rel="alternate" href="commit/eff41fc632d610dd9d746c84829746b938e70497.gph" />
<author>
<name>Constantine Khrulev</name>
<email>[email protected]</email>
</author>
<content type="text">commit eff41fc632d610dd9d746c84829746b938e70497
parent 3e480b22a001a53b48befa2f95309c6b12f5a716
Author: Constantine Khrulev &lt;[email protected]&gt;
Date:   Fri, 14 Feb 2020 06:21:12 -0900

Use \gamma_{T,P,M} for different lapse rates in the manual

This should make our notation a little less confusing.

</content>
</entry>
<entry>
<id>3e480b22a001a53b48befa2f95309c6b12f5a716</id>
<published>2020-02-13T22:18:02Z</published>
<updated>2020-02-13T22:18:02Z</updated>
<title type="text">Fix funding acknowledgments</title>
<link rel="alternate" href="commit/3e480b22a001a53b48befa2f95309c6b12f5a716.gph" />
<author>
<name>Constantine Khrulev</name>
<email>[email protected]</email>
</author>
<content type="text">commit 3e480b22a001a53b48befa2f95309c6b12f5a716
parent f24d0a177c6d00d87e92ed61ce61a88630658ae7
Author: Constantine Khrulev &lt;[email protected]&gt;
Date:   Thu, 13 Feb 2020 13:18:02 -0900

Fix funding acknowledgments

(There was a no cost extension.)

</content>
</entry>
<entry>
<id>f24d0a177c6d00d87e92ed61ce61a88630658ae7</id>
<published>2020-02-13T19:04:14Z</published>
<updated>2020-02-13T19:04:14Z</updated>
<title type="text">Update the CircleCI banner in the README</title>
<link rel="alternate" href="commit/f24d0a177c6d00d87e92ed61ce61a88630658ae7.gph" />
<author>
<name>Constantine Khrulev</name>
<email>[email protected]</email>
</author>
<content type="text">commit f24d0a177c6d00d87e92ed61ce61a88630658ae7
parent 44db29423af6bdab2b5c990d08793010b2476cc5
Author: Constantine Khrulev &lt;[email protected]&gt;
Date:   Thu, 13 Feb 2020 10:04:14 -0900

Update the CircleCI banner in the README

</content>
</entry>
<entry>
<id>44db29423af6bdab2b5c990d08793010b2476cc5</id>
<published>2020-02-12T05:24:05Z</published>
<updated>2020-02-12T05:24:05Z</updated>
<title type="text">Update the list of configuration parameters</title>
<link rel="alternate" href="commit/44db29423af6bdab2b5c990d08793010b2476cc5.gph" />
<author>
<name>Constantine Khrulev</name>
<email>[email protected]</email>
</author>
<content type="text">commit 44db29423af6bdab2b5c990d08793010b2476cc5
parent 7a2376419c9c94ee5393ed09411fc835402d68a8
Author: Constantine Khrulev &lt;[email protected]&gt;
Date:   Tue, 11 Feb 2020 20:24:05 -0900

Update the list of configuration parameters

</content>
</entry>
<entry>
<id>7a2376419c9c94ee5393ed09411fc835402d68a8</id>
<published>2020-02-12T05:23:54Z</published>
<updated>2020-02-12T05:23:54Z</updated>
<title type="text">Clean up pism_config.cdl</title>
<link rel="alternate" href="commit/7a2376419c9c94ee5393ed09411fc835402d68a8.gph" />
<author>
<name>Constantine Khrulev</name>
<email>[email protected]</email>
</author>
<content type="text">commit 7a2376419c9c94ee5393ed09411fc835402d68a8
parent 00d9843cfaeaf740fb47ecf0f1f7853331f5f208
Author: Constantine Khrulev &lt;[email protected]&gt;
Date:   Tue, 11 Feb 2020 20:23:54 -0900

Clean up pism_config.cdl

</content>
</entry>
<entry>
<id>00d9843cfaeaf740fb47ecf0f1f7853331f5f208</id>
<published>2020-02-12T04:47:50Z</published>
<updated>2020-02-12T04:59:56Z</updated>
<title type="text">Merge branch &#39;v1.2-pre-release&#39;</title>
<link rel="alternate" href="commit/00d9843cfaeaf740fb47ecf0f1f7853331f5f208.gph" />
<author>
<name>Constantine Khrulev</name>
<email>[email protected]</email>
</author>
<content type="text">commit 00d9843cfaeaf740fb47ecf0f1f7853331f5f208
parent 67de15fd46d4dc840d965095c13eada1e39a380d
Author: Constantine Khrulev &lt;[email protected]&gt;
Date:   Tue, 11 Feb 2020 19:47:50 -0900

Merge branch &#39;v1.2-pre-release&#39;

</content>
</entry>
<entry>
<id>0d0e1ac117d0a357584c9ec459a6de03ebf176c5</id>
<published>2020-02-11T23:14:36Z</published>
<updated>2020-02-11T23:50:18Z</updated>
<title type="text">Update PISM version in preparation for the release</title>
<link rel="alternate" href="commit/0d0e1ac117d0a357584c9ec459a6de03ebf176c5.gph" />
<author>
<name>Constantine Khrulev</name>
<email>[email protected]</email>
</author>
<content type="text">commit 0d0e1ac117d0a357584c9ec459a6de03ebf176c5
parent 100110ae356510a763e9c807b98746345b7f600f
Author: Constantine Khrulev &lt;[email protected]&gt;
Date:   Tue, 11 Feb 2020 14:14:36 -0900

Update PISM version in preparation for the release

</content>
</entry>
<entry>
<id>100110ae356510a763e9c807b98746345b7f600f</id>
<published>2020-02-11T23:14:04Z</published>
<updated>2020-02-11T23:14:04Z</updated>
<title type="text">Fix year comparison in acknowledge.py</title>
<link rel="alternate" href="commit/100110ae356510a763e9c807b98746345b7f600f.gph" />
<author>
<name>Constantine Khrulev</name>
<email>[email protected]</email>
</author>
<content type="text">commit 100110ae356510a763e9c807b98746345b7f600f
parent 6bc2f50e7607a380992770b629c2553e233d3688
Author: Constantine Khrulev &lt;[email protected]&gt;
Date:   Tue, 11 Feb 2020 14:14:04 -0900

Fix year comparison in acknowledge.py

</content>
</entry>
<entry>
<id>6bc2f50e7607a380992770b629c2553e233d3688</id>
<published>2020-02-11T21:19:33Z</published>
<updated>2020-02-11T21:19:33Z</updated>
<title type="text">Fix a regression test</title>
<link rel="alternate" href="commit/6bc2f50e7607a380992770b629c2553e233d3688.gph" />
<author>
<name>Constantine Khrulev</name>
<email>[email protected]</email>
</author>
<content type="text">commit 6bc2f50e7607a380992770b629c2553e233d3688
parent 152dba9b1a0f0f088ecc487b55575d669856676a
Author: Constantine Khrulev &lt;[email protected]&gt;
Date:   Tue, 11 Feb 2020 12:19:33 -0900

Fix a regression test

</content>
</entry>
<entry>
<id>152dba9b1a0f0f088ecc487b55575d669856676a</id>
<published>2020-02-11T20:57:39Z</published>
<updated>2020-02-11T20:57:39Z</updated>
<title type="text">Remove CONTRIBUTING.md</title>
<link rel="alternate" href="commit/152dba9b1a0f0f088ecc487b55575d669856676a.gph" />
<author>
<name>Constantine Khrulev</name>
<email>[email protected]</email>
</author>
<content type="text">commit 152dba9b1a0f0f088ecc487b55575d669856676a
parent 982467d563dc0f446111190600e995deb3b22a04
Author: Constantine Khrulev &lt;[email protected]&gt;
Date:   Tue, 11 Feb 2020 11:57:39 -0900

Remove CONTRIBUTING.md

Oops. It turns out I already created CONTRIBUTING.rst...

</content>
</entry>
<entry>
<id>982467d563dc0f446111190600e995deb3b22a04</id>
<published>2020-02-11T20:52:26Z</published>
<updated>2020-02-11T20:52:26Z</updated>
<title type="text">Fix a link in README.rst</title>
<link rel="alternate" href="commit/982467d563dc0f446111190600e995deb3b22a04.gph" />
<author>
<name>Constantine Khrulev</name>
<email>[email protected]</email>
</author>
<content type="text">commit 982467d563dc0f446111190600e995deb3b22a04
parent 293c80ea84e596ecefbcec65253c5ef0a457af4e
Author: Constantine Khrulev &lt;[email protected]&gt;
Date:   Tue, 11 Feb 2020 11:52:26 -0900

Fix a link in README.rst
</content>
</entry>
<entry>
<id>293c80ea84e596ecefbcec65253c5ef0a457af4e</id>
<published>2020-02-11T20:48:44Z</published>
<updated>2020-02-11T20:48:44Z</updated>
<title type="text">Add a period at the end of a sentence</title>
<link rel="alternate" href="commit/293c80ea84e596ecefbcec65253c5ef0a457af4e.gph" />
<author>
<name>Constantine Khrulev</name>
<email>[email protected]</email>
</author>
<content type="text">commit 293c80ea84e596ecefbcec65253c5ef0a457af4e
parent 42eb6d8b9132c1a9d914353d515c89835e366b84
Author: Constantine Khrulev &lt;[email protected]&gt;
Date:   Tue, 11 Feb 2020 11:48:44 -0900

Add a period at the end of a sentence

</content>
</entry>
<entry>
<id>42eb6d8b9132c1a9d914353d515c89835e366b84</id>
<published>2020-02-11T20:46:31Z</published>
<updated>2020-02-11T20:46:31Z</updated>
<title type="text">Add SUPPORT.md and mention the PISM workspace on Slack in README.rst</title>
<link rel="alternate" href="commit/42eb6d8b9132c1a9d914353d515c89835e366b84.gph" />
<author>
<name>Constantine Khrulev</name>
<email>[email protected]</email>
</author>
<content type="text">commit 42eb6d8b9132c1a9d914353d515c89835e366b84
parent 557fb021cfbcbf0fa343e48eb5028e0257402793
Author: Constantine Khrulev &lt;[email protected]&gt;
Date:   Tue, 11 Feb 2020 11:46:31 -0900

Add SUPPORT.md and mention the PISM workspace on Slack in README.rst

</content>
</entry>
<entry>
<id>557fb021cfbcbf0fa343e48eb5028e0257402793</id>
<published>2020-02-11T20:33:10Z</published>
<updated>2020-02-11T20:33:10Z</updated>
<title type="text">Edit the feature request template</title>
<link rel="alternate" href="commit/557fb021cfbcbf0fa343e48eb5028e0257402793.gph" />
<author>
<name>Constantine Khrulev</name>
<email>[email protected]</email>
</author>
<content type="text">commit 557fb021cfbcbf0fa343e48eb5028e0257402793
parent 544f7678bb38f9a1222646fe57c2a526d9ac134a
Author: Constantine Khrulev &lt;[email protected]&gt;
Date:   Tue, 11 Feb 2020 11:33:10 -0900

Edit the feature request template

</content>
</entry>
<entry>
<id>544f7678bb38f9a1222646fe57c2a526d9ac134a</id>
<published>2020-02-11T19:51:25Z</published>
<updated>2020-02-11T20:28:36Z</updated>
<title type="text">Add CONTRIBUTING.md with a link to the manual</title>
<link rel="alternate" href="commit/544f7678bb38f9a1222646fe57c2a526d9ac134a.gph" />
<author>
<name>Constantine Khrulev</name>
<email>[email protected]</email>
</author>
<content type="text">commit 544f7678bb38f9a1222646fe57c2a526d9ac134a
parent 3931d49f1a3dccd51c74a92bb31f25ebe7f4fe2e
Author: Constantine Khrulev &lt;[email protected]&gt;
Date:   Tue, 11 Feb 2020 10:51:25 -0900

Add CONTRIBUTING.md with a link to the manual
</content>
</entry>
<entry>
<id>3931d49f1a3dccd51c74a92bb31f25ebe7f4fe2e</id>
<published>2020-02-11T19:33:04Z</published>
<updated>2020-02-11T20:28:23Z</updated>
<title type="text">Add issue templates</title>
<link rel="alternate" href="commit/3931d49f1a3dccd51c74a92bb31f25ebe7f4fe2e.gph" />
<author>
<name>Constantine Khrulev</name>
<email>[email protected]</email>
</author>
<content type="text">commit 3931d49f1a3dccd51c74a92bb31f25ebe7f4fe2e
parent cbb56b2dbbfcdd87c2d5a166b197f6c13aba1eb8
Author: Constantine Khrulev &lt;[email protected]&gt;
Date:   Tue, 11 Feb 2020 10:33:04 -0900

Add issue templates
</content>
</entry>
<entry>
<id>cbb56b2dbbfcdd87c2d5a166b197f6c13aba1eb8</id>
<published>2020-02-11T20:11:00Z</published>
<updated>2020-02-11T20:13:01Z</updated>
<title type="text">Update copyright year in the manual</title>
<link rel="alternate" href="commit/cbb56b2dbbfcdd87c2d5a166b197f6c13aba1eb8.gph" />
<author>
<name>Constantine Khrulev</name>
<email>[email protected]</email>
</author>
<content type="text">commit cbb56b2dbbfcdd87c2d5a166b197f6c13aba1eb8
parent 28f1a9118a0d01a141031a073b0b86b691551ec2
Author: Constantine Khrulev &lt;[email protected]&gt;
Date:   Tue, 11 Feb 2020 11:11:00 -0900

Update copyright year in the manual

</content>
</entry>
<entry>
<id>28f1a9118a0d01a141031a073b0b86b691551ec2</id>
<published>2020-02-11T20:08:46Z</published>
<updated>2020-02-11T20:08:46Z</updated>
<title type="text">Add a pull request template</title>
<link rel="alternate" href="commit/28f1a9118a0d01a141031a073b0b86b691551ec2.gph" />
<author>
<name>Constantine Khrulev</name>
<email>[email protected]</email>
</author>
<content type="text">commit 28f1a9118a0d01a141031a073b0b86b691551ec2
parent 0e3656fbed38367444f8ba3abf08c02d1f02d752
Author: Constantine Khrulev &lt;[email protected]&gt;
Date:   Tue, 11 Feb 2020 11:08:46 -0900

Add a pull request template
</content>
</entry>
<entry>
<id>0e3656fbed38367444f8ba3abf08c02d1f02d752</id>
<published>2020-01-20T22:21:50Z</published>
<updated>2020-01-20T22:21:50Z</updated>
<title type="text">Merge branch &#39;ckhroulev/precip-scaling&#39; into dev</title>
<link rel="alternate" href="commit/0e3656fbed38367444f8ba3abf08c02d1f02d752.gph" />
<author>
<name>Constantine Khrulev</name>
<email>[email protected]</email>
</author>
<content type="text">commit 0e3656fbed38367444f8ba3abf08c02d1f02d752
parent 5a962f8dd1b578f1248e47a90e4fd8ce613db5d7
Author: Constantine Khrulev &lt;[email protected]&gt;
Date:   Mon, 20 Jan 2020 13:21:50 -0900

Merge branch &#39;ckhroulev/precip-scaling&#39; into dev

</content>
</entry>
<entry>
<id>bc9d8579c500958d9f955d2eb2ec4351855bcec7</id>
<published>2020-01-16T19:55:36Z</published>
<updated>2020-01-17T00:33:07Z</updated>
<title type="text">Update regression tests to include exp. scaling of precip. and SMB</title>
<link rel="alternate" href="commit/bc9d8579c500958d9f955d2eb2ec4351855bcec7.gph" />
<author>
<name>Constantine Khrulev</name>
<email>[email protected]</email>
</author>
<content type="text">commit bc9d8579c500958d9f955d2eb2ec4351855bcec7
parent 0a59009e546492a10704c2cc7574d78049b5e7f3
Author: Constantine Khrulev &lt;[email protected]&gt;
Date:   Thu, 16 Jan 2020 10:55:36 -0900

Update regression tests to include exp. scaling of precip. and SMB

</content>
</entry>
<entry>
<id>0a59009e546492a10704c2cc7574d78049b5e7f3</id>
<published>2020-01-16T01:21:14Z</published>
<updated>2020-01-17T00:33:07Z</updated>
<title type="text">Document -surface elevation_change and -atmosphere elevation_change</title>
<link rel="alternate" href="commit/0a59009e546492a10704c2cc7574d78049b5e7f3.gph" />
<author>
<name>Constantine Khrulev</name>
<email>[email protected]</email>
</author>
<content type="text">commit 0a59009e546492a10704c2cc7574d78049b5e7f3
parent 98d9fff0a46c0c580b4a8bbb8915e02de1cd994a
Author: Constantine Khrulev &lt;[email protected]&gt;
Date:   Wed, 15 Jan 2020 16:21:14 -0900

Document -surface elevation_change and -atmosphere elevation_change

</content>
</entry>
<entry>
<id>98d9fff0a46c0c580b4a8bbb8915e02de1cd994a</id>
<published>2020-01-15T23:54:30Z</published>
<updated>2020-01-17T00:10:15Z</updated>
<title type="text">Add scaling of SMB with an exp. factor (similar to a precip. adjustment)</title>
<link rel="alternate" href="commit/98d9fff0a46c0c580b4a8bbb8915e02de1cd994a.gph" />
<author>
<name>Constantine Khrulev</name>
<email>[email protected]</email>
</author>
<content type="text">commit 98d9fff0a46c0c580b4a8bbb8915e02de1cd994a
parent 0b3100e6847d1d847215c56fd68b976a9e63285d
Author: Constantine Khrulev &lt;[email protected]&gt;
Date:   Wed, 15 Jan 2020 14:54:30 -0900

Add scaling of SMB with an exp. factor (similar to a precip. adjustment)

- Rename &quot;-surface lapse_rate&quot; to &quot;-surface elevation_change&quot;: now this modifier includes
 an adjustment that is not a lapse rate.

- Rename all related configuration parameters.

- Add a config. parameter surface.elevation_change.smb.method: &quot;scale&quot; to use the
 exponential factor (see surface.elevation_change.smb.exp_factor); &quot;shift&quot; to use the lapse
 rate (see surface.elevation_change.smb.lapse_rate)

- Add surface.elevation_change.smb.exp_factor:

 SMB = SMB_input * exp(C * dT),

 where C = surface.elevation_change.smb.exp_factor and dT is the change in surface
 temperature computed using surface.elevation_change.temperature_lapse_rate

</content>
</entry>
<entry>
<id>0b3100e6847d1d847215c56fd68b976a9e63285d</id>
<published>2020-01-15T22:05:37Z</published>
<updated>2020-01-17T00:10:06Z</updated>
<title type="text">Add precip. scaling in response to lapse-rate-driven temperature changes</title>
<link rel="alternate" href="commit/0b3100e6847d1d847215c56fd68b976a9e63285d.gph" />
<author>
<name>Constantine Khrulev</name>
<email>[email protected]</email>
</author>
<content type="text">commit 0b3100e6847d1d847215c56fd68b976a9e63285d
parent 581a423ad401a65ac98f3d000aff522822d47e1a
Author: Constantine Khrulev &lt;[email protected]&gt;
Date:   Wed, 15 Jan 2020 13:05:37 -0900

Add precip. scaling in response to lapse-rate-driven temperature changes

- Rename atmosphere.elevation_change.precipitation_lapse_rate to
 atmosphere.elevation_change.precipitation.lapse_rate (&quot;.&quot; instead of &quot;_&quot;).

- Add atmosphere.elevation_change.precipitation.method (option -precip_adjustment).

 Set it to &quot;scale&quot; to use scaling with exp(C * dT), where

 C = atmosphere.precip_exponential_factor_for_temperature

 dT is computed using provided reference surface elevation and
 atmosphere.elevation_change.temperature_lapse_rate

 Set it to &quot;shift&quot; to use atmosphere.elevation_change.precipitation.lapse_rate.

</content>
</entry>
<entry>
<id>581a423ad401a65ac98f3d000aff522822d47e1a</id>
<published>2020-01-15T20:18:04Z</published>
<updated>2020-01-16T23:53:03Z</updated>
<title type="text">Rename -atmosphere lapse_rate to -atmosphere elevation_change</title>
<link rel="alternate" href="commit/581a423ad401a65ac98f3d000aff522822d47e1a.gph" />
<author>
<name>Constantine Khrulev</name>
<email>[email protected]</email>
</author>
<content type="text">commit 581a423ad401a65ac98f3d000aff522822d47e1a
parent bc63649c153c25eb6e0d47afd6f604c8df4f90ae
Author: Constantine Khrulev &lt;[email protected]&gt;
Date:   Wed, 15 Jan 2020 11:18:04 -0900

Rename -atmosphere lapse_rate to -atmosphere elevation_change

This modifier will include adjustments other than lapse rates.

</content>
</entry>
<entry>
<id>bc63649c153c25eb6e0d47afd6f604c8df4f90ae</id>
<published>2020-01-15T19:52:48Z</published>
<updated>2020-01-16T23:53:03Z</updated>
<title type="text">Rename paleo_precip to precip_scaling</title>
<link rel="alternate" href="commit/bc63649c153c25eb6e0d47afd6f604c8df4f90ae.gph" />
<author>
<name>Constantine Khrulev</name>
<email>[email protected]</email>
</author>
<content type="text">commit bc63649c153c25eb6e0d47afd6f604c8df4f90ae
parent 5a962f8dd1b578f1248e47a90e4fd8ce613db5d7
Author: Constantine Khrulev &lt;[email protected]&gt;
Date:   Wed, 15 Jan 2020 10:52:48 -0900

Rename paleo_precip to precip_scaling

Scaling precipitation using air temperature offsets is useful in other contexts too (not
just paleo-climate runs).

</content>
</entry>
<entry>
<id>5a962f8dd1b578f1248e47a90e4fd8ce613db5d7</id>
<published>2020-01-16T22:29:48Z</published>
<updated>2020-01-16T22:38:19Z</updated>
<title type="text">Add regression tests for ForcingOptions</title>
<link rel="alternate" href="commit/5a962f8dd1b578f1248e47a90e4fd8ce613db5d7.gph" />
<author>
<name>Constantine Khrulev</name>
<email>[email protected]</email>
</author>
<content type="text">commit 5a962f8dd1b578f1248e47a90e4fd8ce613db5d7
parent ef4fed808da69e0435df87b756b3cb9ac196901d
Author: Constantine Khrulev &lt;[email protected]&gt;
Date:   Thu, 16 Jan 2020 13:29:48 -0900

Add regression tests for ForcingOptions

</content>
</entry>
<entry>
<id>ef4fed808da69e0435df87b756b3cb9ac196901d</id>
<published>2020-01-14T23:06:07Z</published>
<updated>2020-01-14T23:11:06Z</updated>
<title type="text">Fix #448 (Bug in Timeseries)</title>
<link rel="alternate" href="commit/ef4fed808da69e0435df87b756b3cb9ac196901d.gph" />
<author>
<name>Constantine Khrulev</name>
<email>[email protected]</email>
</author>
<content type="text">commit ef4fed808da69e0435df87b756b3cb9ac196901d
parent 259c25e2140f69abe2b3248f13f3c200bedb19ec
Author: Constantine Khrulev &lt;[email protected]&gt;
Date:   Tue, 14 Jan 2020 14:06:07 -0900

Fix #448 (Bug in Timeseries)

Before this change the linear interpolation code in Timeseries::operator() was wrong (used
incorrect indexes). This bug affected the `dev` branch (*not* the &quot;stable&quot; release).

Also: fix the corresponding regression test: when testing linear interpolation we
should *not* use interval midpoints.

</content>
</entry>
<entry>
<id>259c25e2140f69abe2b3248f13f3c200bedb19ec</id>
<published>2020-01-14T05:02:04Z</published>
<updated>2020-01-14T05:02:04Z</updated>
<title type="text">Fix file name capitalization</title>
<link rel="alternate" href="commit/259c25e2140f69abe2b3248f13f3c200bedb19ec.gph" />
<author>
<name>Constantine Khrulev</name>
<email>[email protected]</email>
</author>
<content type="text">commit 259c25e2140f69abe2b3248f13f3c200bedb19ec
parent 990da6ee957520a08440b822740b52211218c22e
Author: Constantine Khrulev &lt;[email protected]&gt;
Date:   Mon, 13 Jan 2020 20:02:04 -0900

Fix file name capitalization

</content>
</entry>
<entry>
<id>990da6ee957520a08440b822740b52211218c22e</id>
<published>2019-03-01T19:37:39Z</published>
<updated>2020-01-14T00:01:45Z</updated>
<title type="text">Add a Python wrapper for IceModelVec3Custom</title>
<link rel="alternate" href="commit/990da6ee957520a08440b822740b52211218c22e.gph" />
<author>
<name>Constantine Khrulev</name>
<email>[email protected]</email>
</author>
<content type="text">commit 990da6ee957520a08440b822740b52211218c22e
parent 0cbc88a1fbdf1894ca2c0f2253a3a6db069d0874
Author: Constantine Khrulev &lt;[email protected]&gt;
Date:   Fri,  1 Mar 2019 10:37:39 -0900

Add a Python wrapper for IceModelVec3Custom

(Now I can test BlatterStressBalance from Python.)

</content>
</entry>
<entry>
<id>0cbc88a1fbdf1894ca2c0f2253a3a6db069d0874</id>
<published>2020-01-13T23:10:46Z</published>
<updated>2020-01-14T00:01:01Z</updated>
<title type="text">Clean up IceModelVec3Custom</title>
<link rel="alternate" href="commit/0cbc88a1fbdf1894ca2c0f2253a3a6db069d0874.gph" />
<author>
<name>Constantine Khrulev</name>
<email>[email protected]</email>
</author>
<content type="text">commit 0cbc88a1fbdf1894ca2c0f2253a3a6db069d0874
parent 6959082eee79fc614f6250828de640149af51877
Author: Constantine Khrulev &lt;[email protected]&gt;
Date:   Mon, 13 Jan 2020 14:10:46 -0900

Clean up IceModelVec3Custom

</content>
</entry>
<entry>
<id>6959082eee79fc614f6250828de640149af51877</id>
<published>2020-01-11T00:59:48Z</published>
<updated>2020-01-11T00:59:48Z</updated>
<title type="text">Update the list of diagnostics</title>
<link rel="alternate" href="commit/6959082eee79fc614f6250828de640149af51877.gph" />
<author>
<name>Constantine Khrulev</name>
<email>[email protected]</email>
</author>
<content type="text">commit 6959082eee79fc614f6250828de640149af51877
parent 47583fef695cbd98b5c3ff307323332a7116edef
Author: Constantine Khrulev &lt;[email protected]&gt;
Date:   Fri, 10 Jan 2020 15:59:48 -0900

Update the list of diagnostics

</content>
</entry>
<entry>
<id>47583fef695cbd98b5c3ff307323332a7116edef</id>
<published>2020-01-10T21:12:06Z</published>
<updated>2020-01-11T00:54:23Z</updated>
<title type="text">Work on ensuring that the list of diagnostics is complete</title>
<link rel="alternate" href="commit/47583fef695cbd98b5c3ff307323332a7116edef.gph" />
<author>
<name>Constantine Khrulev</name>
<email>[email protected]</email>
</author>
<content type="text">commit 47583fef695cbd98b5c3ff307323332a7116edef
parent b2c52b2ef13e5f04d8165ee35d799213472c03d7
Author: Constantine Khrulev &lt;[email protected]&gt;
Date:   Fri, 10 Jan 2020 12:12:06 -0900

Work on ensuring that the list of diagnostics is complete

</content>
</entry>
<entry>
<id>b2c52b2ef13e5f04d8165ee35d799213472c03d7</id>
<published>2020-01-10T21:38:04Z</published>
<updated>2020-01-10T23:27:07Z</updated>
<title type="text">Rename ocean_pressure_difference to ice_margin_pressure_difference</title>
<link rel="alternate" href="commit/b2c52b2ef13e5f04d8165ee35d799213472c03d7.gph" />
<author>
<name>Constantine Khrulev</name>
<email>[email protected]</email>
</author>
<content type="text">commit b2c52b2ef13e5f04d8165ee35d799213472c03d7
parent e3eba5da0989aecd104b08c3fd81d4a4e6af4f7d
Author: Constantine Khrulev &lt;[email protected]&gt;
Date:   Fri, 10 Jan 2020 12:38:04 -0900

Rename ocean_pressure_difference to ice_margin_pressure_difference

</content>
</entry>
<entry>
<id>e3eba5da0989aecd104b08c3fd81d4a4e6af4f7d</id>
<published>2019-12-25T00:33:01Z</published>
<updated>2019-12-25T00:33:01Z</updated>
<title type="text">Make sure the generated list of parameters is sorted</title>
<link rel="alternate" href="commit/e3eba5da0989aecd104b08c3fd81d4a4e6af4f7d.gph" />
<author>
<name>Constantine Khrulev</name>
<email>[email protected]</email>
</author>
<content type="text">commit e3eba5da0989aecd104b08c3fd81d4a4e6af4f7d
parent 908c51a4a5ad9f973fa3e839e6d6c2350155e431
Author: Constantine Khrulev &lt;[email protected]&gt;
Date:   Tue, 24 Dec 2019 15:33:01 -0900

Make sure the generated list of parameters is sorted

</content>
</entry>
<entry>
<id>908c51a4a5ad9f973fa3e839e6d6c2350155e431</id>
<published>2019-12-25T00:29:57Z</published>
<updated>2019-12-25T00:29:57Z</updated>
<title type="text">Remove {atmosphere,ocean,sea_level}.model</title>
<link rel="alternate" href="commit/908c51a4a5ad9f973fa3e839e6d6c2350155e431.gph" />
<author>
<name>Constantine Khrulev</name>
<email>[email protected]</email>
</author>
<content type="text">commit 908c51a4a5ad9f973fa3e839e6d6c2350155e431
parent eba37d4b8d3aac97a37490f2a37cf1330f8d32c8
Author: Constantine Khrulev &lt;[email protected]&gt;
Date:   Tue, 24 Dec 2019 15:29:57 -0900

Remove {atmosphere,ocean,sea_level}.model

We use {atmosphere,...}.models now.

</content>
</entry>
<entry>
<id>eba37d4b8d3aac97a37490f2a37cf1330f8d32c8</id>
<published>2019-12-25T00:21:19Z</published>
<updated>2019-12-25T00:23:45Z</updated>
<title type="text">Update doc/sphinx/Makefile</title>
<link rel="alternate" href="commit/eba37d4b8d3aac97a37490f2a37cf1330f8d32c8.gph" />
<author>
<name>Constantine Khrulev</name>
<email>[email protected]</email>
</author>
<content type="text">commit eba37d4b8d3aac97a37490f2a37cf1330f8d32c8
parent 8e48577607c572916bb46b19fa35f446dd4d7b79
Author: Constantine Khrulev &lt;[email protected]&gt;
Date:   Tue, 24 Dec 2019 15:21:19 -0900

Update doc/sphinx/Makefile

- fix the target generating install_libraries.sh (we need to remove &quot;`&quot;s)
- use &quot;-bootstrap&quot; when generating diagnostics.json
- add the &quot;clean&quot; target

</content>
</entry>
<entry>
<id>8e48577607c572916bb46b19fa35f446dd4d7b79</id>
<published>2019-12-24T05:52:03Z</published>
<updated>2019-12-25T00:19:27Z</updated>
<title type="text">Improve list_diagnostics.py</title>
<link rel="alternate" href="commit/8e48577607c572916bb46b19fa35f446dd4d7b79.gph" />
<author>
<name>Constantine Khrulev</name>
<email>[email protected]</email>
</author>
<content type="text">commit 8e48577607c572916bb46b19fa35f446dd4d7b79
parent a298ed634fbd620db6bf550f1bd6232bb888bcb8
Author: Constantine Khrulev &lt;[email protected]&gt;
Date:   Mon, 23 Dec 2019 20:52:03 -0900

Improve list_diagnostics.py

Now list_diagnostics.py can process multiple JSON files, making it possible to run PISM
several times to extract lists of available diagnostics.

</content>
</entry>
<entry>
<id>a298ed634fbd620db6bf550f1bd6232bb888bcb8</id>
<published>2019-12-24T05:51:41Z</published>
<updated>2019-12-24T05:51:41Z</updated>
<title type="text">Change the order of items in the release checklist</title>
<link rel="alternate" href="commit/a298ed634fbd620db6bf550f1bd6232bb888bcb8.gph" />
<author>
<name>Constantine Khrulev</name>
<email>[email protected]</email>
</author>
<content type="text">commit a298ed634fbd620db6bf550f1bd6232bb888bcb8
parent dcd56c6cc2de3726ed53accb2a86b181b3500026
Author: Constantine Khrulev &lt;[email protected]&gt;
Date:   Mon, 23 Dec 2019 20:51:41 -0900

Change the order of items in the release checklist

</content>
</entry>
<entry>
<id>dcd56c6cc2de3726ed53accb2a86b181b3500026</id>
<published>2019-12-24T05:46:29Z</published>
<updated>2019-12-24T05:46:29Z</updated>
<title type="text">Run &quot;make -C doc&quot; to update lists of funding sources</title>
<link rel="alternate" href="commit/dcd56c6cc2de3726ed53accb2a86b181b3500026.gph" />
<author>
<name>Constantine Khrulev</name>
<email>[email protected]</email>
</author>
<content type="text">commit dcd56c6cc2de3726ed53accb2a86b181b3500026
parent 774ff455b2f7e5b8e5b7ee34f5daebca87b7d351
Author: Constantine Khrulev &lt;[email protected]&gt;
Date:   Mon, 23 Dec 2019 20:46:29 -0900

Run &quot;make -C doc&quot; to update lists of funding sources

</content>
</entry>
<entry>
<id>774ff455b2f7e5b8e5b7ee34f5daebca87b7d351</id>
<published>2019-12-24T05:44:23Z</published>
<updated>2019-12-24T05:44:23Z</updated>
<title type="text">Update the list of configuration parameters</title>
<link rel="alternate" href="commit/774ff455b2f7e5b8e5b7ee34f5daebca87b7d351.gph" />
<author>
<name>Constantine Khrulev</name>
<email>[email protected]</email>
</author>
<content type="text">commit 774ff455b2f7e5b8e5b7ee34f5daebca87b7d351
parent 4edcc2239ce683b0ca995ac780987086cf5670cb
Author: Constantine Khrulev &lt;[email protected]&gt;
Date:   Mon, 23 Dec 2019 20:44:23 -0900

Update the list of configuration parameters

</content>
</entry>
<entry>
<id>4edcc2239ce683b0ca995ac780987086cf5670cb</id>
<published>2019-12-23T23:02:02Z</published>
<updated>2019-12-23T23:02:02Z</updated>
<title type="text">Re-organize the v1.1 -- v1.2 section of the change log</title>
<link rel="alternate" href="commit/4edcc2239ce683b0ca995ac780987086cf5670cb.gph" />
<author>
<name>Constantine Khrulev</name>
<email>[email protected]</email>
</author>
<content type="text">commit 4edcc2239ce683b0ca995ac780987086cf5670cb
parent 8a228c0ff3f94b0ad0b86daae1a329b5df1f6c89
Author: Constantine Khrulev &lt;[email protected]&gt;
Date:   Mon, 23 Dec 2019 14:02:02 -0900

Re-organize the v1.1 -- v1.2 section of the change log

</content>
</entry>
<entry>
<id>8a228c0ff3f94b0ad0b86daae1a329b5df1f6c89</id>
<published>2019-12-23T22:00:10Z</published>
<updated>2019-12-23T22:00:10Z</updated>
<title type="text">Add release checklist to technical notes</title>
<link rel="alternate" href="commit/8a228c0ff3f94b0ad0b86daae1a329b5df1f6c89.gph" />
<author>
<name>Constantine Khrulev</name>
<email>[email protected]</email>
</author>
<content type="text">commit 8a228c0ff3f94b0ad0b86daae1a329b5df1f6c89
parent c934dca103812a575b49ed5f8f770b87154af6e6
Author: Constantine Khrulev &lt;[email protected]&gt;
Date:   Mon, 23 Dec 2019 13:00:10 -0900

Add release checklist to technical notes

</content>
</entry>
<entry>
<id>c934dca103812a575b49ed5f8f770b87154af6e6</id>
<published>2019-04-24T19:27:47Z</published>
<updated>2019-12-23T20:05:19Z</updated>
<title type="text">Remove unnecessary (and harmful) smart pointer initializations</title>
<link rel="alternate" href="commit/c934dca103812a575b49ed5f8f770b87154af6e6.gph" />
<author>
<name>Constantine Khrulev</name>
<email>[email protected]</email>
</author>
<content type="text">commit c934dca103812a575b49ed5f8f770b87154af6e6
parent 253381d75b0cbe7c953f890a371ec1f9ac222aa2
Author: Constantine Khrulev &lt;[email protected]&gt;
Date:   Wed, 24 Apr 2019 11:27:47 -0800

Remove unnecessary (and harmful) smart pointer initializations

</content>
</entry>
<entry>
<id>253381d75b0cbe7c953f890a371ec1f9ac222aa2</id>
<published>2019-04-01T17:40:07Z</published>
<updated>2019-12-23T20:04:58Z</updated>
<title type="text">Use std::shared_ptr&lt;T&gt;() instead of nullptr and NULL</title>
<link rel="alternate" href="commit/253381d75b0cbe7c953f890a371ec1f9ac222aa2.gph" />
<author>
<name>Constantine Khrulev</name>
<email>[email protected]</email>
</author>
<content type="text">commit 253381d75b0cbe7c953f890a371ec1f9ac222aa2
parent 6393690458e74cd18dfa3e76a817914a6ed68d35
Author: Constantine Khrulev &lt;[email protected]&gt;
Date:   Mon,  1 Apr 2019 09:40:07 -0800

Use std::shared_ptr&lt;T&gt;() instead of nullptr and NULL

.. trying to fix a compilation issue with Intel 17.

</content>
</entry>
<entry>
<id>67de15fd46d4dc840d965095c13eada1e39a380d</id>
<published>2019-12-17T14:29:45Z</published>
<updated>2019-12-17T14:29:45Z</updated>
<title type="text">Added missing build file</title>
<link rel="alternate" href="commit/67de15fd46d4dc840d965095c13eada1e39a380d.gph" />
<author>
<name>Elizabeth Fischer</name>
<email>[email protected]</email>
</author>
<content type="text">commit 67de15fd46d4dc840d965095c13eada1e39a380d
parent d06d8e581484b5a2fb157722341094933ce91ac8
Author: Elizabeth Fischer &lt;[email protected]&gt;
Date:   Tue, 17 Dec 2019 09:29:45 -0500

Added missing build file

</content>
</entry>
<entry>
<id>6393690458e74cd18dfa3e76a817914a6ed68d35</id>
<published>2019-12-12T05:39:28Z</published>
<updated>2019-12-12T18:09:41Z</updated>
<title type="text">Fix a bug in File::write_attribute()</title>
<link rel="alternate" href="commit/6393690458e74cd18dfa3e76a817914a6ed68d35.gph" />
<author>
<name>Constantine Khrulev</name>
<email>[email protected]</email>
</author>
<content type="text">commit 6393690458e74cd18dfa3e76a817914a6ed68d35
parent fb29aa056b4294282807f3564be41eb3b3014c27
Author: Constantine Khrulev &lt;[email protected]&gt;
Date:   Wed, 11 Dec 2019 20:39:28 -0900

Fix a bug in File::write_attribute()

We have to call redef() first.

</content>
</entry>
<entry>
<id>fb29aa056b4294282807f3564be41eb3b3014c27</id>
<published>2019-12-11T20:58:53Z</published>
<updated>2019-12-12T18:09:32Z</updated>
<title type="text">Cleanup</title>
<link rel="alternate" href="commit/fb29aa056b4294282807f3564be41eb3b3014c27.gph" />
<author>
<name>Constantine Khrulev</name>
<email>[email protected]</email>
</author>
<content type="text">commit fb29aa056b4294282807f3564be41eb3b3014c27
parent 57c1d365ee63a5667246d90f5ec57c8b9ece11a7
Author: Constantine Khrulev &lt;[email protected]&gt;
Date:   Wed, 11 Dec 2019 11:58:53 -0900

Cleanup

- There is no need to compare to true.
- Replace &amp;&amp; with &quot;and&quot; for readability.
- Remove an unneeded code block (&quot;{ ... }&quot;).
- Clean up .dir-locals.el.

</content>
</entry>
<entry>
<id>57c1d365ee63a5667246d90f5ec57c8b9ece11a7</id>
<published>2019-12-11T04:37:48Z</published>
<updated>2019-12-11T20:37:43Z</updated>
<title type="text">SSAFD has to store u_ssa and v_ssa in m/s to avoid precision loss</title>
<link rel="alternate" href="commit/57c1d365ee63a5667246d90f5ec57c8b9ece11a7.gph" />
<author>
<name>Constantine Khrulev</name>
<email>[email protected]</email>
</author>
<content type="text">commit 57c1d365ee63a5667246d90f5ec57c8b9ece11a7
parent 33ec58f5d5c2bb1896c433c6c91ad2a27a70a54d
Author: Constantine Khrulev &lt;[email protected]&gt;
Date:   Tue, 10 Dec 2019 19:37:48 -0900

SSAFD has to store u_ssa and v_ssa in m/s to avoid precision loss

.. caused by unit conversion to m/year and back when saving and re-starting the model.

</content>
</entry>
</feed>